Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CSNK1G3Q9Y6M4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1G3Q9Y6M4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CSNK1G3Q9Y6M4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1G3Q9Y6M4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CSNK1G3Q9Y6M4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1G3Q9Y6M4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1G3Q9Y6M4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.48■□□□□ 0.87
CSNK1G3Q9Y6M4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSNK1G3Q9Y6M4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CSNK1G3Q9Y6M4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.47■□□□□ 0.87
CSNK1G3Q9Y6M4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CSNK1G3Q9Y6M4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.47■□□□□ 0.87
CSNK1G3Q9Y6M4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.47■□□□□ 0.87
CSNK1G3Q9Y6M4 ITM2C-210ENST00000620962 501 ntBASIC20.47■□□□□ 0.87
CSNK1G3Q9Y6M4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.47■□□□□ 0.87
CSNK1G3Q9Y6M4 AC066615.1-201ENST00000640911 628 ntBASIC20.47■□□□□ 0.87
CSNK1G3Q9Y6M4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
CSNK1G3Q9Y6M4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSNK1G3Q9Y6M4 EP400NL-214ENST00000641289 2402 ntBASIC20.47■□□□□ 0.87
CSNK1G3Q9Y6M4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CSNK1G3Q9Y6M4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.47■□□□□ 0.87
CSNK1G3Q9Y6M4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.46■□□□□ 0.87
CSNK1G3Q9Y6M4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSNK1G3Q9Y6M4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSNK1G3Q9Y6M4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSNK1G3Q9Y6M4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.46■□□□□ 0.87
CSNK1G3Q9Y6M4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CSNK1G3Q9Y6M4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSNK1G3Q9Y6M4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.46■□□□□ 0.87
CSNK1G3Q9Y6M4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.46■□□□□ 0.87
CSNK1G3Q9Y6M4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CSNK1G3Q9Y6M4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CSNK1G3Q9Y6M4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CSNK1G3Q9Y6M4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.46■□□□□ 0.87
CSNK1G3Q9Y6M4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CSNK1G3Q9Y6M4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSNK1G3Q9Y6M4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
CSNK1G3Q9Y6M4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.46■□□□□ 0.87
CSNK1G3Q9Y6M4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1G3Q9Y6M4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.45■□□□□ 0.86
CSNK1G3Q9Y6M4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1G3Q9Y6M4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1G3Q9Y6M4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CSNK1G3Q9Y6M4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1G3Q9Y6M4 AC091874.3-201ENST00000512672 1195 ntBASIC20.45■□□□□ 0.86
CSNK1G3Q9Y6M4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.45■□□□□ 0.86
CSNK1G3Q9Y6M4 AC083880.1-201ENST00000608266 535 ntBASIC20.45■□□□□ 0.86
CSNK1G3Q9Y6M4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1G3Q9Y6M4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1G3Q9Y6M4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.45■□□□□ 0.86
CSNK1G3Q9Y6M4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1G3Q9Y6M4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1G3Q9Y6M4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CSNK1G3Q9Y6M4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.45■□□□□ 0.86
CSNK1G3Q9Y6M4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1G3Q9Y6M4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSNK1G3Q9Y6M4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CSNK1G3Q9Y6M4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CSNK1G3Q9Y6M4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSNK1G3Q9Y6M4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSNK1G3Q9Y6M4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CSNK1G3Q9Y6M4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
CSNK1G3Q9Y6M4 AC245052.3-201ENST00000450182 901 ntBASIC20.44■□□□□ 0.86
CSNK1G3Q9Y6M4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.44■□□□□ 0.86
CSNK1G3Q9Y6M4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.44■□□□□ 0.86
CSNK1G3Q9Y6M4 FAM21FP-204ENST00000608637 956 ntBASIC20.44■□□□□ 0.86
CSNK1G3Q9Y6M4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSNK1G3Q9Y6M4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CSNK1G3Q9Y6M4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.44■□□□□ 0.86
CSNK1G3Q9Y6M4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CSNK1G3Q9Y6M4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSNK1G3Q9Y6M4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CSNK1G3Q9Y6M4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSNK1G3Q9Y6M4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CSNK1G3Q9Y6M4 AC091799.1-201ENST00000422823 811 ntBASIC20.43■□□□□ 0.86
CSNK1G3Q9Y6M4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.43■□□□□ 0.86
CSNK1G3Q9Y6M4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.43■□□□□ 0.86
CSNK1G3Q9Y6M4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.43■□□□□ 0.86
CSNK1G3Q9Y6M4 AC100791.3-201ENST00000617619 330 ntBASIC20.43■□□□□ 0.86
CSNK1G3Q9Y6M4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.43■□□□□ 0.86
CSNK1G3Q9Y6M4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CSNK1G3Q9Y6M4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CSNK1G3Q9Y6M4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSNK1G3Q9Y6M4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 KRT18P29-201ENST00000397031 1267 ntBASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms