Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP4S1Q9Y587 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.74■□□□□ 0.75
AP4S1Q9Y587 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
AP4S1Q9Y587 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP4S1Q9Y587 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP4S1Q9Y587 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.74■□□□□ 0.75
AP4S1Q9Y587 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP4S1Q9Y587 AC112907.3-201ENST00000577781 2400 ntBASIC19.74■□□□□ 0.75
AP4S1Q9Y587 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP4S1Q9Y587 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.74■□□□□ 0.75
AP4S1Q9Y587 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4S1Q9Y587 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.73■□□□□ 0.75
AP4S1Q9Y587 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
AP4S1Q9Y587 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4S1Q9Y587 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.73■□□□□ 0.75
AP4S1Q9Y587 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4S1Q9Y587 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
AP4S1Q9Y587 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4S1Q9Y587 AL020996.1-203ENST00000536896 2307 ntBASIC19.73■□□□□ 0.75
AP4S1Q9Y587 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
AP4S1Q9Y587 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4S1Q9Y587 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.73■□□□□ 0.75
AP4S1Q9Y587 ATP5G2P3-201ENST00000429083 425 ntBASIC19.73■□□□□ 0.75
AP4S1Q9Y587 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.73■□□□□ 0.75
AP4S1Q9Y587 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4S1Q9Y587 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4S1Q9Y587 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4S1Q9Y587 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4S1Q9Y587 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.72■□□□□ 0.75
AP4S1Q9Y587 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
AP4S1Q9Y587 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4S1Q9Y587 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4S1Q9Y587 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.72■□□□□ 0.75
AP4S1Q9Y587 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.72■□□□□ 0.75
AP4S1Q9Y587 AC004987.1-201ENST00000428627 508 ntBASIC19.72■□□□□ 0.75
AP4S1Q9Y587 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4S1Q9Y587 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.72■□□□□ 0.75
AP4S1Q9Y587 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4S1Q9Y587 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4S1Q9Y587 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4S1Q9Y587 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4S1Q9Y587 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.72■□□□□ 0.75
AP4S1Q9Y587 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4S1Q9Y587 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP4S1Q9Y587 AC021242.3-201ENST00000607598 1377 ntBASIC19.71■□□□□ 0.75
AP4S1Q9Y587 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.71■□□□□ 0.75
AP4S1Q9Y587 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP4S1Q9Y587 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
AP4S1Q9Y587 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.71■□□□□ 0.75
AP4S1Q9Y587 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP4S1Q9Y587 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP4S1Q9Y587 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.71■□□□□ 0.75
AP4S1Q9Y587 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
AP4S1Q9Y587 AC068587.7-201ENST00000641602 218 ntBASIC19.71■□□□□ 0.75
AP4S1Q9Y587 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
AP4S1Q9Y587 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
AP4S1Q9Y587 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
AP4S1Q9Y587 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
AP4S1Q9Y587 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.7■□□□□ 0.74
AP4S1Q9Y587 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4S1Q9Y587 AC007225.1-201ENST00000566331 1836 ntBASIC19.7■□□□□ 0.74
AP4S1Q9Y587 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
AP4S1Q9Y587 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4S1Q9Y587 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.7■□□□□ 0.74
AP4S1Q9Y587 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AP4S1Q9Y587 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4S1Q9Y587 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.7■□□□□ 0.74
AP4S1Q9Y587 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4S1Q9Y587 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
AP4S1Q9Y587 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4S1Q9Y587 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4S1Q9Y587 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4S1Q9Y587 AC121338.2-201ENST00000622535 1744 ntBASIC19.7■□□□□ 0.74
AP4S1Q9Y587 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4S1Q9Y587 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4S1Q9Y587 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
AP4S1Q9Y587 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4S1Q9Y587 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
AP4S1Q9Y587 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.7■□□□□ 0.74
AP4S1Q9Y587 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4S1Q9Y587 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 AC103724.3-201ENST00000564481 992 ntBASIC19.69■□□□□ 0.74
AP4S1Q9Y587 AL034346.1-201ENST00000568244 1277 ntBASIC19.69■□□□□ 0.74
AP4S1Q9Y587 NTF6A-201ENST00000591175 560 ntBASIC19.69■□□□□ 0.74
AP4S1Q9Y587 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms