Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
SIT1Q9Y3P8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SIT1Q9Y3P8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIT1Q9Y3P8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.15■□□□□ 0.98
SIT1Q9Y3P8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIT1Q9Y3P8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.15■□□□□ 0.98
SIT1Q9Y3P8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIT1Q9Y3P8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIT1Q9Y3P8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.15■□□□□ 0.98
SIT1Q9Y3P8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIT1Q9Y3P8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.15■□□□□ 0.98
SIT1Q9Y3P8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SIT1Q9Y3P8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.15■□□□□ 0.98
SIT1Q9Y3P8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIT1Q9Y3P8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIT1Q9Y3P8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SIT1Q9Y3P8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.14■□□□□ 0.98
SIT1Q9Y3P8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.14■□□□□ 0.98
SIT1Q9Y3P8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SIT1Q9Y3P8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SIT1Q9Y3P8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.14■□□□□ 0.98
SIT1Q9Y3P8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SIT1Q9Y3P8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SIT1Q9Y3P8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SIT1Q9Y3P8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIT1Q9Y3P8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.14■□□□□ 0.97
SIT1Q9Y3P8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.14■□□□□ 0.97
SIT1Q9Y3P8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.14■□□□□ 0.97
SIT1Q9Y3P8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.14■□□□□ 0.97
SIT1Q9Y3P8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.14■□□□□ 0.97
SIT1Q9Y3P8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.14■□□□□ 0.97
SIT1Q9Y3P8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
SIT1Q9Y3P8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.14■□□□□ 0.97
SIT1Q9Y3P8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIT1Q9Y3P8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SIT1Q9Y3P8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.13■□□□□ 0.97
SIT1Q9Y3P8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SIT1Q9Y3P8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SIT1Q9Y3P8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SIT1Q9Y3P8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SIT1Q9Y3P8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.13■□□□□ 0.97
SIT1Q9Y3P8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SIT1Q9Y3P8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIT1Q9Y3P8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIT1Q9Y3P8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIT1Q9Y3P8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIT1Q9Y3P8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SIT1Q9Y3P8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SIT1Q9Y3P8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIT1Q9Y3P8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.12■□□□□ 0.97
SIT1Q9Y3P8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIT1Q9Y3P8 AL049637.2-201ENST00000641778 930 ntBASIC21.12■□□□□ 0.97
SIT1Q9Y3P8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIT1Q9Y3P8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIT1Q9Y3P8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.12■□□□□ 0.97
SIT1Q9Y3P8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SIT1Q9Y3P8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.11■□□□□ 0.97
SIT1Q9Y3P8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIT1Q9Y3P8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SIT1Q9Y3P8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SIT1Q9Y3P8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIT1Q9Y3P8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.11■□□□□ 0.97
SIT1Q9Y3P8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.11■□□□□ 0.97
SIT1Q9Y3P8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.11■□□□□ 0.97
SIT1Q9Y3P8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SIT1Q9Y3P8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.11■□□□□ 0.97
SIT1Q9Y3P8 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.11■□□□□ 0.97
SIT1Q9Y3P8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SIT1Q9Y3P8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIT1Q9Y3P8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 MIR4785-201ENST00000585005 73 ntBASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 AC003102.1-202ENST00000563394 1796 ntBASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SIT1Q9Y3P8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIT1Q9Y3P8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIT1Q9Y3P8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.09■□□□□ 0.97
SIT1Q9Y3P8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms