Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
PCDHGB4Q9UN71 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PCDHGB4Q9UN71 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB4Q9UN71 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB4Q9UN71 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB4Q9UN71 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB4Q9UN71 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB4Q9UN71 AL136116.3-201ENST00000402907 1138 ntBASIC20.17■□□□□ 0.82
PCDHGB4Q9UN71 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PCDHGB4Q9UN71 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGB4Q9UN71 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PCDHGB4Q9UN71 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB4Q9UN71 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB4Q9UN71 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB4Q9UN71 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
PCDHGB4Q9UN71 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGB4Q9UN71 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB4Q9UN71 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB4Q9UN71 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGB4Q9UN71 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB4Q9UN71 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGB4Q9UN71 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB4Q9UN71 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB4Q9UN71 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
PCDHGB4Q9UN71 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB4Q9UN71 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGB4Q9UN71 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
PCDHGB4Q9UN71 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB4Q9UN71 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB4Q9UN71 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB4Q9UN71 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB4Q9UN71 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGB4Q9UN71 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PCDHGB4Q9UN71 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB4Q9UN71 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
PCDHGB4Q9UN71 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB4Q9UN71 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB4Q9UN71 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGB4Q9UN71 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.15■□□□□ 0.82
PCDHGB4Q9UN71 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGB4Q9UN71 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.15■□□□□ 0.82
PCDHGB4Q9UN71 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB4Q9UN71 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB4Q9UN71 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGB4Q9UN71 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB4Q9UN71 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB4Q9UN71 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB4Q9UN71 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHGB4Q9UN71 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB4Q9UN71 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHGB4Q9UN71 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCDHGB4Q9UN71 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB4Q9UN71 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHGB4Q9UN71 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB4Q9UN71 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB4Q9UN71 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB4Q9UN71 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB4Q9UN71 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGB4Q9UN71 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHGB4Q9UN71 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB4Q9UN71 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGB4Q9UN71 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGB4Q9UN71 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB4Q9UN71 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDHGB4Q9UN71 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB4Q9UN71 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
PCDHGB4Q9UN71 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
PCDHGB4Q9UN71 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB4Q9UN71 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 AIRN-201ENST00000601203 4374 ntBASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 FEM1AP1-201ENST00000431297 1995 ntBASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB4Q9UN71 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB4Q9UN71 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHGB4Q9UN71 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGB4Q9UN71 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms