Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.74■■□□□ 1.07
PPARGC1AQ9UBK2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPARGC1AQ9UBK2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
PPARGC1AQ9UBK2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.74■■□□□ 1.07
PPARGC1AQ9UBK2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PPARGC1AQ9UBK2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PPARGC1AQ9UBK2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPARGC1AQ9UBK2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.73■■□□□ 1.07
PPARGC1AQ9UBK2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PPARGC1AQ9UBK2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPARGC1AQ9UBK2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.73■■□□□ 1.07
PPARGC1AQ9UBK2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.73■■□□□ 1.07
PPARGC1AQ9UBK2 KRT18P20-201ENST00000548986 1279 ntBASIC21.73■■□□□ 1.07
PPARGC1AQ9UBK2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.73■■□□□ 1.07
PPARGC1AQ9UBK2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PPARGC1AQ9UBK2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPARGC1AQ9UBK2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPARGC1AQ9UBK2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPARGC1AQ9UBK2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPARGC1AQ9UBK2 SLC25A24-204ENST00000569674 2357 ntBASIC21.73■■□□□ 1.07
PPARGC1AQ9UBK2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PPARGC1AQ9UBK2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PPARGC1AQ9UBK2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PPARGC1AQ9UBK2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PPARGC1AQ9UBK2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.72■■□□□ 1.07
PPARGC1AQ9UBK2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.72■■□□□ 1.07
PPARGC1AQ9UBK2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PPARGC1AQ9UBK2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PPARGC1AQ9UBK2 POU5F1P4-201ENST00000413175 1085 ntBASIC21.72■■□□□ 1.07
PPARGC1AQ9UBK2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.72■■□□□ 1.07
PPARGC1AQ9UBK2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.72■■□□□ 1.07
PPARGC1AQ9UBK2 AC022517.1-201ENST00000592429 346 ntBASIC21.72■■□□□ 1.07
PPARGC1AQ9UBK2 AC008175.2-201ENST00000612840 297 ntBASIC21.72■■□□□ 1.07
PPARGC1AQ9UBK2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.72■■□□□ 1.07
PPARGC1AQ9UBK2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PPARGC1AQ9UBK2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PPARGC1AQ9UBK2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.72■■□□□ 1.07
PPARGC1AQ9UBK2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.72■■□□□ 1.07
PPARGC1AQ9UBK2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PPARGC1AQ9UBK2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PPARGC1AQ9UBK2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PPARGC1AQ9UBK2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PPARGC1AQ9UBK2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.71■■□□□ 1.07
PPARGC1AQ9UBK2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PPARGC1AQ9UBK2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PPARGC1AQ9UBK2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PPARGC1AQ9UBK2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PPARGC1AQ9UBK2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.71■■□□□ 1.07
PPARGC1AQ9UBK2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.71■■□□□ 1.07
PPARGC1AQ9UBK2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PPARGC1AQ9UBK2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PPARGC1AQ9UBK2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PPARGC1AQ9UBK2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PPARGC1AQ9UBK2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PPARGC1AQ9UBK2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.7■■□□□ 1.07
PPARGC1AQ9UBK2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPARGC1AQ9UBK2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PPARGC1AQ9UBK2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PPARGC1AQ9UBK2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.7■■□□□ 1.06
PPARGC1AQ9UBK2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.7■■□□□ 1.06
PPARGC1AQ9UBK2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.7■■□□□ 1.06
PPARGC1AQ9UBK2 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.7■■□□□ 1.06
PPARGC1AQ9UBK2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PPARGC1AQ9UBK2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPARGC1AQ9UBK2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.7■■□□□ 1.06
PPARGC1AQ9UBK2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPARGC1AQ9UBK2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPARGC1AQ9UBK2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.7■■□□□ 1.06
PPARGC1AQ9UBK2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PPARGC1AQ9UBK2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PPARGC1AQ9UBK2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.69■■□□□ 1.06
PPARGC1AQ9UBK2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.69■■□□□ 1.06
PPARGC1AQ9UBK2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.69■■□□□ 1.06
PPARGC1AQ9UBK2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.69■■□□□ 1.06
PPARGC1AQ9UBK2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.69■■□□□ 1.06
PPARGC1AQ9UBK2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PPARGC1AQ9UBK2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PPARGC1AQ9UBK2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.69■■□□□ 1.06
PPARGC1AQ9UBK2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PPARGC1AQ9UBK2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.69■■□□□ 1.06
PPARGC1AQ9UBK2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PPARGC1AQ9UBK2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PPARGC1AQ9UBK2 AC026310.3-201ENST00000625186 2373 ntBASIC21.68■■□□□ 1.06
PPARGC1AQ9UBK2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.68■■□□□ 1.06
PPARGC1AQ9UBK2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PPARGC1AQ9UBK2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPARGC1AQ9UBK2 AC137761.2-201ENST00000561729 223 ntBASIC21.68■■□□□ 1.06
PPARGC1AQ9UBK2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.68■■□□□ 1.06
PPARGC1AQ9UBK2 AC145350.3-201ENST00000569033 163 ntBASIC21.68■■□□□ 1.06
PPARGC1AQ9UBK2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.68■■□□□ 1.06
PPARGC1AQ9UBK2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PPARGC1AQ9UBK2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPARGC1AQ9UBK2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPARGC1AQ9UBK2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.68■■□□□ 1.06
PPARGC1AQ9UBK2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPARGC1AQ9UBK2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PPARGC1AQ9UBK2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PPARGC1AQ9UBK2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PPARGC1AQ9UBK2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
PPARGC1AQ9UBK2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms