Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
LIN7CQ9NUP9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LIN7CQ9NUP9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LIN7CQ9NUP9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LIN7CQ9NUP9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LIN7CQ9NUP9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LIN7CQ9NUP9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LIN7CQ9NUP9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.3■□□□□ 0.36
LIN7CQ9NUP9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.3■□□□□ 0.36
LIN7CQ9NUP9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.3■□□□□ 0.36
LIN7CQ9NUP9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.3■□□□□ 0.36
LIN7CQ9NUP9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LIN7CQ9NUP9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.3■□□□□ 0.36
LIN7CQ9NUP9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LIN7CQ9NUP9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LIN7CQ9NUP9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LIN7CQ9NUP9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LIN7CQ9NUP9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LIN7CQ9NUP9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LIN7CQ9NUP9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 IRS3P-201ENST00000223076 1006 ntBASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 MIR572-201ENST00000384983 95 ntBASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN7CQ9NUP9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.28■□□□□ 0.36
LIN7CQ9NUP9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LIN7CQ9NUP9 AP006587.3-201ENST00000525742 1516 ntBASIC17.27■□□□□ 0.36
LIN7CQ9NUP9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.27■□□□□ 0.36
LIN7CQ9NUP9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LIN7CQ9NUP9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms