Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.91■■□□□ 1.42
RNF146Q9NTX7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RNF146Q9NTX7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.91■■□□□ 1.42
RNF146Q9NTX7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF146Q9NTX7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF146Q9NTX7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RNF146Q9NTX7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
RNF146Q9NTX7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF146Q9NTX7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF146Q9NTX7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RNF146Q9NTX7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RNF146Q9NTX7 AL355472.2-201ENST00000422958 438 ntBASIC23.9■■□□□ 1.42
RNF146Q9NTX7 POU5F1P3-201ENST00000428824 1078 ntBASIC23.9■■□□□ 1.42
RNF146Q9NTX7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.9■■□□□ 1.42
RNF146Q9NTX7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.9■■□□□ 1.42
RNF146Q9NTX7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.9■■□□□ 1.42
RNF146Q9NTX7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF146Q9NTX7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF146Q9NTX7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF146Q9NTX7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF146Q9NTX7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
RNF146Q9NTX7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.89■■□□□ 1.41
RNF146Q9NTX7 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.89■■□□□ 1.41
RNF146Q9NTX7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.89■■□□□ 1.41
RNF146Q9NTX7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RNF146Q9NTX7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
RNF146Q9NTX7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF146Q9NTX7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
RNF146Q9NTX7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.89■■□□□ 1.41
RNF146Q9NTX7 GUSBP5-202ENST00000510805 1989 ntBASIC23.89■■□□□ 1.41
RNF146Q9NTX7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF146Q9NTX7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF146Q9NTX7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.88■■□□□ 1.41
RNF146Q9NTX7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF146Q9NTX7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF146Q9NTX7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF146Q9NTX7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF146Q9NTX7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF146Q9NTX7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF146Q9NTX7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.88■■□□□ 1.41
RNF146Q9NTX7 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.88■■□□□ 1.41
RNF146Q9NTX7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF146Q9NTX7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.88■■□□□ 1.41
RNF146Q9NTX7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
RNF146Q9NTX7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.88■■□□□ 1.41
RNF146Q9NTX7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.88■■□□□ 1.41
RNF146Q9NTX7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.88■■□□□ 1.41
RNF146Q9NTX7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF146Q9NTX7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF146Q9NTX7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF146Q9NTX7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF146Q9NTX7 AC233723.2-201ENST00000623798 2106 ntBASIC23.87■■□□□ 1.41
RNF146Q9NTX7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.87■■□□□ 1.41
RNF146Q9NTX7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.87■■□□□ 1.41
RNF146Q9NTX7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF146Q9NTX7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF146Q9NTX7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RNF146Q9NTX7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF146Q9NTX7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.87■■□□□ 1.41
RNF146Q9NTX7 LSM12P1-201ENST00000411836 588 ntBASIC23.87■■□□□ 1.41
RNF146Q9NTX7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.87■■□□□ 1.41
RNF146Q9NTX7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RNF146Q9NTX7 KRT17P1-201ENST00000399211 1546 ntBASIC23.87■■□□□ 1.41
RNF146Q9NTX7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RNF146Q9NTX7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RNF146Q9NTX7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF146Q9NTX7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF146Q9NTX7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF146Q9NTX7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF146Q9NTX7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF146Q9NTX7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF146Q9NTX7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
RNF146Q9NTX7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.86■■□□□ 1.41
RNF146Q9NTX7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RNF146Q9NTX7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.86■■□□□ 1.41
RNF146Q9NTX7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.86■■□□□ 1.41
RNF146Q9NTX7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF146Q9NTX7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF146Q9NTX7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.86■■□□□ 1.41
RNF146Q9NTX7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
RNF146Q9NTX7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.85■■□□□ 1.41
RNF146Q9NTX7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.85■■□□□ 1.41
RNF146Q9NTX7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF146Q9NTX7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF146Q9NTX7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF146Q9NTX7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.85■■□□□ 1.41
RNF146Q9NTX7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.85■■□□□ 1.41
RNF146Q9NTX7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.85■■□□□ 1.41
RNF146Q9NTX7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF146Q9NTX7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF146Q9NTX7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.84■■□□□ 1.41
RNF146Q9NTX7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF146Q9NTX7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF146Q9NTX7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF146Q9NTX7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF146Q9NTX7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF146Q9NTX7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF146Q9NTX7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
RNF146Q9NTX7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.84■■□□□ 1.41
RNF146Q9NTX7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms