Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 AC026310.3-201ENST00000625186 2373 ntBASIC21.45■■□□□ 1.02
ATP13A1Q9HD20 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP13A1Q9HD20 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.02
ATP13A1Q9HD20 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.02
ATP13A1Q9HD20 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP13A1Q9HD20 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.45■■□□□ 1.02
ATP13A1Q9HD20 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.45■■□□□ 1.02
ATP13A1Q9HD20 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.45■■□□□ 1.02
ATP13A1Q9HD20 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP13A1Q9HD20 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ATP13A1Q9HD20 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP13A1Q9HD20 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP13A1Q9HD20 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.02
ATP13A1Q9HD20 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
ATP13A1Q9HD20 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATP13A1Q9HD20 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP13A1Q9HD20 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP13A1Q9HD20 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP13A1Q9HD20 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP13A1Q9HD20 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATP13A1Q9HD20 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.44■■□□□ 1.02
ATP13A1Q9HD20 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.44■■□□□ 1.02
ATP13A1Q9HD20 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATP13A1Q9HD20 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATP13A1Q9HD20 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.44■■□□□ 1.02
ATP13A1Q9HD20 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
ATP13A1Q9HD20 RARRES2P11-201ENST00000635158 484 ntBASIC21.44■■□□□ 1.02
ATP13A1Q9HD20 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP13A1Q9HD20 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP13A1Q9HD20 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.44■■□□□ 1.02
ATP13A1Q9HD20 Z98882.1-201ENST00000622160 2253 ntBASIC21.44■■□□□ 1.02
ATP13A1Q9HD20 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP13A1Q9HD20 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.44■■□□□ 1.02
ATP13A1Q9HD20 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ATP13A1Q9HD20 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.43■■□□□ 1.02
ATP13A1Q9HD20 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ATP13A1Q9HD20 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP13A1Q9HD20 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP13A1Q9HD20 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP13A1Q9HD20 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP13A1Q9HD20 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
ATP13A1Q9HD20 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.43■■□□□ 1.02
ATP13A1Q9HD20 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.43■■□□□ 1.02
ATP13A1Q9HD20 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.43■■□□□ 1.02
ATP13A1Q9HD20 AC073111.5-205ENST00000641717 521 ntBASIC21.43■■□□□ 1.02
ATP13A1Q9HD20 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.43■■□□□ 1.02
ATP13A1Q9HD20 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP13A1Q9HD20 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.43■■□□□ 1.02
ATP13A1Q9HD20 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
ATP13A1Q9HD20 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP13A1Q9HD20 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
ATP13A1Q9HD20 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.43■■□□□ 1.02
ATP13A1Q9HD20 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATP13A1Q9HD20 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.42■■□□□ 1.02
ATP13A1Q9HD20 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.42■■□□□ 1.02
ATP13A1Q9HD20 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATP13A1Q9HD20 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATP13A1Q9HD20 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.42■■□□□ 1.02
ATP13A1Q9HD20 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATP13A1Q9HD20 AC010536.3-201ENST00000620306 533 ntBASIC21.42■■□□□ 1.02
ATP13A1Q9HD20 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.41■■□□□ 1.02
ATP13A1Q9HD20 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.41■■□□□ 1.02
ATP13A1Q9HD20 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
ATP13A1Q9HD20 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP13A1Q9HD20 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.41■■□□□ 1.02
ATP13A1Q9HD20 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
ATP13A1Q9HD20 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.41■■□□□ 1.02
ATP13A1Q9HD20 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
ATP13A1Q9HD20 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP13A1Q9HD20 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ATP13A1Q9HD20 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.41■■□□□ 1.02
ATP13A1Q9HD20 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP13A1Q9HD20 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP13A1Q9HD20 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP13A1Q9HD20 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.41■■□□□ 1.02
ATP13A1Q9HD20 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP13A1Q9HD20 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ATP13A1Q9HD20 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
ATP13A1Q9HD20 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP13A1Q9HD20 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP13A1Q9HD20 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ATP13A1Q9HD20 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ATP13A1Q9HD20 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
ATP13A1Q9HD20 CDCA4P2-201ENST00000441182 718 ntBASIC21.4■■□□□ 1.02
ATP13A1Q9HD20 AC090192.1-201ENST00000517740 490 ntBASIC21.4■■□□□ 1.02
ATP13A1Q9HD20 DUX4L16-201ENST00000555130 1264 ntBASIC21.4■■□□□ 1.02
ATP13A1Q9HD20 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.4■■□□□ 1.02
ATP13A1Q9HD20 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP13A1Q9HD20 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP13A1Q9HD20 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP13A1Q9HD20 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.4■■□□□ 1.02
ATP13A1Q9HD20 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.39■■□□□ 1.02
ATP13A1Q9HD20 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
ATP13A1Q9HD20 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATP13A1Q9HD20 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATP13A1Q9HD20 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATP13A1Q9HD20 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.39■■□□□ 1.01
ATP13A1Q9HD20 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.39■■□□□ 1.01
ATP13A1Q9HD20 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.39■■□□□ 1.01
ATP13A1Q9HD20 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms