Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCGF1Q9BSM1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.47■□□□□ 0.39
PCGF1Q9BSM1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCGF1Q9BSM1 AC073130.3-201ENST00000624389 2278 ntBASIC17.47■□□□□ 0.39
PCGF1Q9BSM1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCGF1Q9BSM1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PCGF1Q9BSM1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCGF1Q9BSM1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCGF1Q9BSM1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCGF1Q9BSM1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCGF1Q9BSM1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCGF1Q9BSM1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.47■□□□□ 0.39
PCGF1Q9BSM1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.46■□□□□ 0.39
PCGF1Q9BSM1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCGF1Q9BSM1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCGF1Q9BSM1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCGF1Q9BSM1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCGF1Q9BSM1 KRT18P11-201ENST00000435214 1283 ntBASIC17.46■□□□□ 0.39
PCGF1Q9BSM1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.46■□□□□ 0.39
PCGF1Q9BSM1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.46■□□□□ 0.39
PCGF1Q9BSM1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCGF1Q9BSM1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCGF1Q9BSM1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCGF1Q9BSM1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 RNF165-205ENST00000588679 2904 ntBASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 AP001160.3-201ENST00000601484 763 ntBASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.45■□□□□ 0.38
PCGF1Q9BSM1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.44■□□□□ 0.38
PCGF1Q9BSM1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF1Q9BSM1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PCGF1Q9BSM1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF1Q9BSM1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PCGF1Q9BSM1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF1Q9BSM1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF1Q9BSM1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF1Q9BSM1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF1Q9BSM1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF1Q9BSM1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.44■□□□□ 0.38
PCGF1Q9BSM1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
PCGF1Q9BSM1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.44■□□□□ 0.38
PCGF1Q9BSM1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF1Q9BSM1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF1Q9BSM1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF1Q9BSM1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF1Q9BSM1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PCGF1Q9BSM1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
PCGF1Q9BSM1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCGF1Q9BSM1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCGF1Q9BSM1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCGF1Q9BSM1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PCGF1Q9BSM1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCGF1Q9BSM1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCGF1Q9BSM1 FAM99A-202ENST00000538190 1989 ntBASIC17.43■□□□□ 0.38
PCGF1Q9BSM1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCGF1Q9BSM1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.43■□□□□ 0.38
PCGF1Q9BSM1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.43■□□□□ 0.38
PCGF1Q9BSM1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.43■□□□□ 0.38
PCGF1Q9BSM1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCGF1Q9BSM1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCGF1Q9BSM1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.43■□□□□ 0.38
PCGF1Q9BSM1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCGF1Q9BSM1 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.43■□□□□ 0.38
PCGF1Q9BSM1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCGF1Q9BSM1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF1Q9BSM1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.42■□□□□ 0.38
PCGF1Q9BSM1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF1Q9BSM1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF1Q9BSM1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCGF1Q9BSM1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.42■□□□□ 0.38
PCGF1Q9BSM1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF1Q9BSM1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.42■□□□□ 0.38
PCGF1Q9BSM1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF1Q9BSM1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF1Q9BSM1 AC011767.1-201ENST00000617410 1153 ntBASIC17.42■□□□□ 0.38
PCGF1Q9BSM1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms