Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RNF5Q99942 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF5Q99942 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.71■□□□□ 0.27
RNF5Q99942 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RNF5Q99942 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF5Q99942 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF5Q99942 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF5Q99942 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF5Q99942 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF5Q99942 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RNF5Q99942 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
RNF5Q99942 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF5Q99942 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RNF5Q99942 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF5Q99942 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF5Q99942 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF5Q99942 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
RNF5Q99942 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF5Q99942 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF5Q99942 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF5Q99942 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF5Q99942 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF5Q99942 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF5Q99942 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF5Q99942 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF5Q99942 AC034268.1-201ENST00000441047 882 ntBASIC16.7■□□□□ 0.26
RNF5Q99942 AC245052.3-201ENST00000450182 901 ntBASIC16.7■□□□□ 0.26
RNF5Q99942 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.7■□□□□ 0.26
RNF5Q99942 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF5Q99942 MIR6821-201ENST00000617625 74 ntBASIC16.7■□□□□ 0.26
RNF5Q99942 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF5Q99942 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RNF5Q99942 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF5Q99942 AL137060.1-201ENST00000618151 2648 ntBASIC16.7■□□□□ 0.26
RNF5Q99942 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF5Q99942 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF5Q99942 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF5Q99942 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF5Q99942 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF5Q99942 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RNF5Q99942 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF5Q99942 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF5Q99942 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF5Q99942 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF5Q99942 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF5Q99942 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RNF5Q99942 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF5Q99942 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF5Q99942 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RNF5Q99942 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF5Q99942 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF5Q99942 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF5Q99942 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF5Q99942 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF5Q99942 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF5Q99942 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RNF5Q99942 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.69■□□□□ 0.26
RNF5Q99942 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF5Q99942 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF5Q99942 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF5Q99942 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF5Q99942 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF5Q99942 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF5Q99942 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RNF5Q99942 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF5Q99942 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF5Q99942 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF5Q99942 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF5Q99942 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF5Q99942 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF5Q99942 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.68■□□□□ 0.26
RNF5Q99942 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF5Q99942 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF5Q99942 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RNF5Q99942 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF5Q99942 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF5Q99942 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF5Q99942 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF5Q99942 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RNF5Q99942 AF106564.1-201ENST00000607058 2553 ntBASIC16.68■□□□□ 0.26
RNF5Q99942 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF5Q99942 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
RNF5Q99942 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF5Q99942 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RNF5Q99942 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RNF5Q99942 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF5Q99942 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF5Q99942 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF5Q99942 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF5Q99942 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF5Q99942 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.67■□□□□ 0.26
RNF5Q99942 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF5Q99942 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF5Q99942 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
RNF5Q99942 AC004854.2-201ENST00000608450 1441 ntBASIC16.67■□□□□ 0.26
RNF5Q99942 AC121338.2-201ENST00000622535 1744 ntBASIC16.67■□□□□ 0.26
RNF5Q99942 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RNF5Q99942 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF5Q99942 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF5Q99942 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms