Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CDCA3Q99618 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.97■■□□□ 1.11
CDCA3Q99618 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.97■■□□□ 1.11
CDCA3Q99618 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA3Q99618 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA3Q99618 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA3Q99618 ECEL1P3-201ENST00000427961 737 ntBASIC21.97■■□□□ 1.11
CDCA3Q99618 SNORA78-201ENST00000459373 127 ntBASIC21.97■■□□□ 1.11
CDCA3Q99618 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.97■■□□□ 1.11
CDCA3Q99618 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.97■■□□□ 1.11
CDCA3Q99618 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CDCA3Q99618 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CDCA3Q99618 REXO1L12P-201ENST00000622156 912 ntBASIC21.97■■□□□ 1.11
CDCA3Q99618 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.97■■□□□ 1.11
CDCA3Q99618 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.97■■□□□ 1.11
CDCA3Q99618 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.97■■□□□ 1.11
CDCA3Q99618 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA3Q99618 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA3Q99618 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA3Q99618 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.96■■□□□ 1.11
CDCA3Q99618 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA3Q99618 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA3Q99618 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA3Q99618 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA3Q99618 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA3Q99618 AC007322.3-201ENST00000426526 701 ntBASIC21.96■■□□□ 1.11
CDCA3Q99618 FAM210CP-201ENST00000445714 574 ntBASIC21.96■■□□□ 1.11
CDCA3Q99618 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.96■■□□□ 1.11
CDCA3Q99618 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA3Q99618 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.96■■□□□ 1.11
CDCA3Q99618 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.96■■□□□ 1.11
CDCA3Q99618 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA3Q99618 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA3Q99618 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA3Q99618 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA3Q99618 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA3Q99618 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA3Q99618 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
CDCA3Q99618 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CDCA3Q99618 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDCA3Q99618 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CDCA3Q99618 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
CDCA3Q99618 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDCA3Q99618 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDCA3Q99618 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDCA3Q99618 POM121L13P-201ENST00000422362 380 ntBASIC21.95■■□□□ 1.1
CDCA3Q99618 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CDCA3Q99618 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.95■■□□□ 1.1
CDCA3Q99618 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.95■■□□□ 1.1
CDCA3Q99618 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDCA3Q99618 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.1
CDCA3Q99618 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDCA3Q99618 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDCA3Q99618 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.95■■□□□ 1.1
CDCA3Q99618 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CDCA3Q99618 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.94■■□□□ 1.1
CDCA3Q99618 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA3Q99618 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA3Q99618 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA3Q99618 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA3Q99618 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA3Q99618 AC211429.1-201ENST00000415277 523 ntBASIC21.94■■□□□ 1.1
CDCA3Q99618 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA3Q99618 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.94■■□□□ 1.1
CDCA3Q99618 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
CDCA3Q99618 LINC01023-201ENST00000606054 436 ntBASIC21.94■■□□□ 1.1
CDCA3Q99618 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.94■■□□□ 1.1
CDCA3Q99618 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA3Q99618 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA3Q99618 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.94■■□□□ 1.1
CDCA3Q99618 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.94■■□□□ 1.1
CDCA3Q99618 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDCA3Q99618 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDCA3Q99618 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDCA3Q99618 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDCA3Q99618 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDCA3Q99618 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDCA3Q99618 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.93■■□□□ 1.1
CDCA3Q99618 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDCA3Q99618 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CDCA3Q99618 AC233263.1-201ENST00000578059 224 ntBASIC21.93■■□□□ 1.1
CDCA3Q99618 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA3Q99618 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA3Q99618 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.92■■□□□ 1.1
CDCA3Q99618 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA3Q99618 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA3Q99618 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA3Q99618 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA3Q99618 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA3Q99618 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.92■■□□□ 1.1
CDCA3Q99618 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA3Q99618 AC012618.2-201ENST00000428058 849 ntBASIC21.92■■□□□ 1.1
CDCA3Q99618 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA3Q99618 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CDCA3Q99618 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA3Q99618 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDCA3Q99618 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDCA3Q99618 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.91■■□□□ 1.1
CDCA3Q99618 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CDCA3Q99618 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms