Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRICKLE1Q96MT3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.63■■□□□ 1.05
PRICKLE1Q96MT3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
PRICKLE1Q96MT3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRICKLE1Q96MT3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PRICKLE1Q96MT3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.63■■□□□ 1.05
PRICKLE1Q96MT3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRICKLE1Q96MT3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.62■■□□□ 1.05
PRICKLE1Q96MT3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PRICKLE1Q96MT3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PRICKLE1Q96MT3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRICKLE1Q96MT3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
PRICKLE1Q96MT3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.62■■□□□ 1.05
PRICKLE1Q96MT3 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.62■■□□□ 1.05
PRICKLE1Q96MT3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PRICKLE1Q96MT3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRICKLE1Q96MT3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
PRICKLE1Q96MT3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.62■■□□□ 1.05
PRICKLE1Q96MT3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 AC006970.2-201ENST00000450065 779 ntBASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 TERF1P5-201ENST00000477545 1207 ntBASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.61■■□□□ 1.05
PRICKLE1Q96MT3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PRICKLE1Q96MT3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.6■■□□□ 1.05
PRICKLE1Q96MT3 AC007322.1-201ENST00000426983 750 ntBASIC21.6■■□□□ 1.05
PRICKLE1Q96MT3 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.6■■□□□ 1.05
PRICKLE1Q96MT3 AC013268.1-206ENST00000638368 961 ntBASIC21.6■■□□□ 1.05
PRICKLE1Q96MT3 AC112229.1-201ENST00000639295 961 ntBASIC21.6■■□□□ 1.05
PRICKLE1Q96MT3 RBM17P2-201ENST00000616397 1405 ntBASIC21.6■■□□□ 1.05
PRICKLE1Q96MT3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRICKLE1Q96MT3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PRICKLE1Q96MT3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PRICKLE1Q96MT3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRICKLE1Q96MT3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRICKLE1Q96MT3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRICKLE1Q96MT3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRICKLE1Q96MT3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.59■■□□□ 1.05
PRICKLE1Q96MT3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRICKLE1Q96MT3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRICKLE1Q96MT3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
PRICKLE1Q96MT3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.59■■□□□ 1.05
PRICKLE1Q96MT3 AC005181.1-201ENST00000604782 1256 ntBASIC21.59■■□□□ 1.05
PRICKLE1Q96MT3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.59■■□□□ 1.05
PRICKLE1Q96MT3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRICKLE1Q96MT3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRICKLE1Q96MT3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRICKLE1Q96MT3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRICKLE1Q96MT3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRICKLE1Q96MT3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRICKLE1Q96MT3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.58■■□□□ 1.05
PRICKLE1Q96MT3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRICKLE1Q96MT3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRICKLE1Q96MT3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRICKLE1Q96MT3 ID1-201ENST00000376105 1233 ntBASIC21.58■■□□□ 1.05
PRICKLE1Q96MT3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.58■■□□□ 1.05
PRICKLE1Q96MT3 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.58■■□□□ 1.05
PRICKLE1Q96MT3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.58■■□□□ 1.05
PRICKLE1Q96MT3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.58■■□□□ 1.05
PRICKLE1Q96MT3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.58■■□□□ 1.05
PRICKLE1Q96MT3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.58■■□□□ 1.05
PRICKLE1Q96MT3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.58■■□□□ 1.05
PRICKLE1Q96MT3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
PRICKLE1Q96MT3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
PRICKLE1Q96MT3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PRICKLE1Q96MT3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PRICKLE1Q96MT3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
PRICKLE1Q96MT3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.58■■□□□ 1.04
PRICKLE1Q96MT3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.58■■□□□ 1.04
PRICKLE1Q96MT3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PRICKLE1Q96MT3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRICKLE1Q96MT3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRICKLE1Q96MT3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRICKLE1Q96MT3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRICKLE1Q96MT3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRICKLE1Q96MT3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
PRICKLE1Q96MT3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRICKLE1Q96MT3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRICKLE1Q96MT3 HLA-L-209ENST00000420110 1011 ntBASIC21.57■■□□□ 1.04
PRICKLE1Q96MT3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.57■■□□□ 1.04
PRICKLE1Q96MT3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms