Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00477Q96M19 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.63■□□□□ 0.09
LINC00477Q96M19 AC008764.7-201ENST00000593779 1081 ntBASIC15.63■□□□□ 0.09
LINC00477Q96M19 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00477Q96M19 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00477Q96M19 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00477Q96M19 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
LINC00477Q96M19 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00477Q96M19 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00477Q96M19 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00477Q96M19 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00477Q96M19 AC055733.4-201ENST00000638462 1354 ntBASIC15.62■□□□□ 0.09
LINC00477Q96M19 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00477Q96M19 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
LINC00477Q96M19 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00477Q96M19 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00477Q96M19 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00477Q96M19 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.62■□□□□ 0.09
LINC00477Q96M19 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00477Q96M19 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC00477Q96M19 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC00477Q96M19 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC00477Q96M19 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
LINC00477Q96M19 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00477Q96M19 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00477Q96M19 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC00477Q96M19 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00477Q96M19 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00477Q96M19 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00477Q96M19 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC00477Q96M19 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC00477Q96M19 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.62■□□□□ 0.09
LINC00477Q96M19 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00477Q96M19 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00477Q96M19 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
LINC00477Q96M19 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
LINC00477Q96M19 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00477Q96M19 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00477Q96M19 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00477Q96M19 AC005224.4-201ENST00000583262 1652 ntBASIC15.61■□□□□ 0.09
LINC00477Q96M19 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LINC00477Q96M19 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LINC00477Q96M19 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00477Q96M19 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
LINC00477Q96M19 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
LINC00477Q96M19 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.61■□□□□ 0.09
LINC00477Q96M19 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC00477Q96M19 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.61■□□□□ 0.09
LINC00477Q96M19 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LINC00477Q96M19 AC027682.1-201ENST00000562846 899 ntBASIC15.61■□□□□ 0.09
LINC00477Q96M19 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
LINC00477Q96M19 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00477Q96M19 BX005040.4-201ENST00000637145 1518 ntBASIC15.61■□□□□ 0.09
LINC00477Q96M19 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.61■□□□□ 0.09
LINC00477Q96M19 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00477Q96M19 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.61■□□□□ 0.09
LINC00477Q96M19 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00477Q96M19 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.61■□□□□ 0.09
LINC00477Q96M19 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
LINC00477Q96M19 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00477Q96M19 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LINC00477Q96M19 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LINC00477Q96M19 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
LINC00477Q96M19 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00477Q96M19 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00477Q96M19 AC121338.2-201ENST00000622535 1744 ntBASIC15.6■□□□□ 0.09
LINC00477Q96M19 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
LINC00477Q96M19 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
LINC00477Q96M19 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00477Q96M19 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC15.6■□□□□ 0.09
LINC00477Q96M19 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00477Q96M19 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LINC00477Q96M19 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00477Q96M19 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
LINC00477Q96M19 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.6■□□□□ 0.09
LINC00477Q96M19 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00477Q96M19 AC099791.1-201ENST00000416440 715 ntBASIC15.6■□□□□ 0.09
LINC00477Q96M19 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.6■□□□□ 0.09
LINC00477Q96M19 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.6■□□□□ 0.09
LINC00477Q96M19 AC131212.1-201ENST00000613771 668 ntBASIC15.6■□□□□ 0.09
LINC00477Q96M19 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.6■□□□□ 0.09
LINC00477Q96M19 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.6■□□□□ 0.09
LINC00477Q96M19 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.6■□□□□ 0.09
LINC00477Q96M19 TSPY26P-201ENST00000476365 1326 ntBASIC15.6■□□□□ 0.09
LINC00477Q96M19 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00477Q96M19 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00477Q96M19 FEM1AP1-201ENST00000431297 1995 ntBASIC15.6■□□□□ 0.09
LINC00477Q96M19 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00477Q96M19 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.6■□□□□ 0.09
LINC00477Q96M19 AC008406.3-201ENST00000620001 1374 ntBASIC15.6■□□□□ 0.09
LINC00477Q96M19 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00477Q96M19 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.6■□□□□ 0.09
LINC00477Q96M19 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.59■□□□□ 0.09
LINC00477Q96M19 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00477Q96M19 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00477Q96M19 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00477Q96M19 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
LINC00477Q96M19 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
LINC00477Q96M19 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00477Q96M19 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms