Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPG11Q96JI7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SPG11Q96JI7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SPG11Q96JI7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.83■□□□□ 0.44
SPG11Q96JI7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SPG11Q96JI7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SPG11Q96JI7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SPG11Q96JI7 AL135905.2-201ENST00000584934 1404 ntBASIC17.82■□□□□ 0.44
SPG11Q96JI7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPG11Q96JI7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPG11Q96JI7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPG11Q96JI7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPG11Q96JI7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
SPG11Q96JI7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.82■□□□□ 0.44
SPG11Q96JI7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.82■□□□□ 0.44
SPG11Q96JI7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPG11Q96JI7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPG11Q96JI7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPG11Q96JI7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPG11Q96JI7 RCN1P1-201ENST00000400413 996 ntBASIC17.82■□□□□ 0.44
SPG11Q96JI7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.82■□□□□ 0.44
SPG11Q96JI7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SPG11Q96JI7 HLA-B-256ENST00000639848 1089 ntBASIC17.82■□□□□ 0.44
SPG11Q96JI7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.82■□□□□ 0.44
SPG11Q96JI7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPG11Q96JI7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPG11Q96JI7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.81■□□□□ 0.44
SPG11Q96JI7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.81■□□□□ 0.44
SPG11Q96JI7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.81■□□□□ 0.44
SPG11Q96JI7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPG11Q96JI7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPG11Q96JI7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPG11Q96JI7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPG11Q96JI7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.81■□□□□ 0.44
SPG11Q96JI7 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.81■□□□□ 0.44
SPG11Q96JI7 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.81■□□□□ 0.44
SPG11Q96JI7 RN7SL850P-201ENST00000579959 291 ntBASIC17.81■□□□□ 0.44
SPG11Q96JI7 MTDHP1-201ENST00000605323 784 ntBASIC17.81■□□□□ 0.44
SPG11Q96JI7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPG11Q96JI7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPG11Q96JI7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SPG11Q96JI7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPG11Q96JI7 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.8■□□□□ 0.44
SPG11Q96JI7 RN7SL471P-201ENST00000580476 299 ntBASIC17.8■□□□□ 0.44
SPG11Q96JI7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SPG11Q96JI7 AC012306.2-201ENST00000609350 630 ntBASIC17.8■□□□□ 0.44
SPG11Q96JI7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.8■□□□□ 0.44
SPG11Q96JI7 AC061975.6-201ENST00000579045 1553 ntBASIC17.8■□□□□ 0.44
SPG11Q96JI7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPG11Q96JI7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPG11Q96JI7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.8■□□□□ 0.44
SPG11Q96JI7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPG11Q96JI7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPG11Q96JI7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPG11Q96JI7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SPG11Q96JI7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.8■□□□□ 0.44
SPG11Q96JI7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.8■□□□□ 0.44
SPG11Q96JI7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPG11Q96JI7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPG11Q96JI7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPG11Q96JI7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPG11Q96JI7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.79■□□□□ 0.44
SPG11Q96JI7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SPG11Q96JI7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.79■□□□□ 0.44
SPG11Q96JI7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPG11Q96JI7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPG11Q96JI7 AC233702.5-201ENST00000584107 538 ntBASIC17.79■□□□□ 0.44
SPG11Q96JI7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.79■□□□□ 0.44
SPG11Q96JI7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPG11Q96JI7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SPG11Q96JI7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
SPG11Q96JI7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
SPG11Q96JI7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPG11Q96JI7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.79■□□□□ 0.44
SPG11Q96JI7 AC133561.5-201ENST00000635547 218 ntBASIC17.79■□□□□ 0.44
SPG11Q96JI7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPG11Q96JI7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.78■□□□□ 0.44
SPG11Q96JI7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SPG11Q96JI7 KRT17P2-201ENST00000300992 1314 ntBASIC17.78■□□□□ 0.44
SPG11Q96JI7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPG11Q96JI7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPG11Q96JI7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPG11Q96JI7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.78■□□□□ 0.44
SPG11Q96JI7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.78■□□□□ 0.44
SPG11Q96JI7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SPG11Q96JI7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPG11Q96JI7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
SPG11Q96JI7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
SPG11Q96JI7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SPG11Q96JI7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.78■□□□□ 0.44
SPG11Q96JI7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPG11Q96JI7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPG11Q96JI7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPG11Q96JI7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.78■□□□□ 0.44
SPG11Q96JI7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPG11Q96JI7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPG11Q96JI7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPG11Q96JI7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPG11Q96JI7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.77■□□□□ 0.44
SPG11Q96JI7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms