Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh18Q8VHR0 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.61■□□□□ 0.41
Pcdh18Q8VHR0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh18Q8VHR0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh18Q8VHR0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh18Q8VHR0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.61■□□□□ 0.41
Pcdh18Q8VHR0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh18Q8VHR0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh18Q8VHR0 Mir7075-201ENSMUST00000184187 82 ntBASIC17.61■□□□□ 0.41
Pcdh18Q8VHR0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh18Q8VHR0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh18Q8VHR0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdh18Q8VHR0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh18Q8VHR0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh18Q8VHR0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh18Q8VHR0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdh18Q8VHR0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh18Q8VHR0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh18Q8VHR0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh18Q8VHR0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh18Q8VHR0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh18Q8VHR0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh18Q8VHR0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh18Q8VHR0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh18Q8VHR0 Gm12251-201ENSMUST00000117893 792 ntBASIC17.6■□□□□ 0.41
Pcdh18Q8VHR0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.6■□□□□ 0.41
Pcdh18Q8VHR0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pcdh18Q8VHR0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh18Q8VHR0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh18Q8VHR0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh18Q8VHR0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh18Q8VHR0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh18Q8VHR0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh18Q8VHR0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh18Q8VHR0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh18Q8VHR0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdh18Q8VHR0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh18Q8VHR0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh18Q8VHR0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.59■□□□□ 0.41
Pcdh18Q8VHR0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh18Q8VHR0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh18Q8VHR0 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.59■□□□□ 0.41
Pcdh18Q8VHR0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh18Q8VHR0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Pcdh18Q8VHR0 Gm12821-201ENSMUST00000120022 600 ntBASIC17.59■□□□□ 0.41
Pcdh18Q8VHR0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh18Q8VHR0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.59■□□□□ 0.41
Pcdh18Q8VHR0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh18Q8VHR0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.59■□□□□ 0.41
Pcdh18Q8VHR0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.59■□□□□ 0.41
Pcdh18Q8VHR0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdh18Q8VHR0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh18Q8VHR0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pcdh18Q8VHR0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh18Q8VHR0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.58■□□□□ 0.41
Pcdh18Q8VHR0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.58■□□□□ 0.41
Pcdh18Q8VHR0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Pcdh18Q8VHR0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh18Q8VHR0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh18Q8VHR0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh18Q8VHR0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh18Q8VHR0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh18Q8VHR0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh18Q8VHR0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdh18Q8VHR0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh18Q8VHR0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh18Q8VHR0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pcdh18Q8VHR0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pcdh18Q8VHR0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh18Q8VHR0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh18Q8VHR0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh18Q8VHR0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh18Q8VHR0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh18Q8VHR0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh18Q8VHR0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh18Q8VHR0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdh18Q8VHR0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh18Q8VHR0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.57■□□□□ 0.4
Pcdh18Q8VHR0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh18Q8VHR0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh18Q8VHR0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdh18Q8VHR0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.57■□□□□ 0.4
Pcdh18Q8VHR0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh18Q8VHR0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh18Q8VHR0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh18Q8VHR0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh18Q8VHR0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh18Q8VHR0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh18Q8VHR0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdh18Q8VHR0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh18Q8VHR0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh18Q8VHR0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh18Q8VHR0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdh18Q8VHR0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh18Q8VHR0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh18Q8VHR0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdh18Q8VHR0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh18Q8VHR0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh18Q8VHR0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh18Q8VHR0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms