Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 ABCB10P4-201ENST00000566803 2184 ntBASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 PRKY-204ENST00000533551 1019 ntBASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 AC113410.3-201ENST00000623366 203 ntBASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ALMS1Q8TCU4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.27□□□□□ -0.12
ALMS1Q8TCU4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.27□□□□□ -0.12
ALMS1Q8TCU4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
ALMS1Q8TCU4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
ALMS1Q8TCU4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ALMS1Q8TCU4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ALMS1Q8TCU4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.27□□□□□ -0.12
ALMS1Q8TCU4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ALMS1Q8TCU4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ALMS1Q8TCU4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC14.27□□□□□ -0.13
ALMS1Q8TCU4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.27□□□□□ -0.13
ALMS1Q8TCU4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.27□□□□□ -0.13
ALMS1Q8TCU4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.27□□□□□ -0.13
ALMS1Q8TCU4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ALMS1Q8TCU4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.27□□□□□ -0.13
ALMS1Q8TCU4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.27□□□□□ -0.13
ALMS1Q8TCU4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.27□□□□□ -0.13
ALMS1Q8TCU4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ALMS1Q8TCU4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ALMS1Q8TCU4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC14.27□□□□□ -0.13
ALMS1Q8TCU4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
ALMS1Q8TCU4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ALMS1Q8TCU4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
ALMS1Q8TCU4 KRT18P57-201ENST00000443599 1254 ntBASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ALMS1Q8TCU4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms