Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PCDH20Q8N6Y1 C11orf96-202ENST00000528572 1834 ntBASIC21.35■■□□□ 1.01
PCDH20Q8N6Y1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDH20Q8N6Y1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDH20Q8N6Y1 AC026185.1-201ENST00000445748 174 ntBASIC21.35■■□□□ 1.01
PCDH20Q8N6Y1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PCDH20Q8N6Y1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.35■■□□□ 1.01
PCDH20Q8N6Y1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH20Q8N6Y1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH20Q8N6Y1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
PCDH20Q8N6Y1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH20Q8N6Y1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH20Q8N6Y1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH20Q8N6Y1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH20Q8N6Y1 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.34■■□□□ 1.01
PCDH20Q8N6Y1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDH20Q8N6Y1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDH20Q8N6Y1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH20Q8N6Y1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
PCDH20Q8N6Y1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH20Q8N6Y1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH20Q8N6Y1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDH20Q8N6Y1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH20Q8N6Y1 DUX4L16-201ENST00000555130 1264 ntBASIC21.34■■□□□ 1.01
PCDH20Q8N6Y1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDH20Q8N6Y1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PCDH20Q8N6Y1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDH20Q8N6Y1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.34■■□□□ 1.01
PCDH20Q8N6Y1 AC010536.3-201ENST00000620306 533 ntBASIC21.34■■□□□ 1.01
PCDH20Q8N6Y1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH20Q8N6Y1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH20Q8N6Y1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH20Q8N6Y1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDH20Q8N6Y1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH20Q8N6Y1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH20Q8N6Y1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PCDH20Q8N6Y1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDH20Q8N6Y1 AC061975.6-201ENST00000579045 1553 ntBASIC21.33■■□□□ 1.01
PCDH20Q8N6Y1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH20Q8N6Y1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH20Q8N6Y1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDH20Q8N6Y1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDH20Q8N6Y1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDH20Q8N6Y1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDH20Q8N6Y1 AC231657.2-201ENST00000624556 255 ntBASIC21.33■■□□□ 1.01
PCDH20Q8N6Y1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
PCDH20Q8N6Y1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDH20Q8N6Y1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDH20Q8N6Y1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.33■■□□□ 1
PCDH20Q8N6Y1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH20Q8N6Y1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH20Q8N6Y1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.32■■□□□ 1
PCDH20Q8N6Y1 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.32■■□□□ 1
PCDH20Q8N6Y1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH20Q8N6Y1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.32■■□□□ 1
PCDH20Q8N6Y1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH20Q8N6Y1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH20Q8N6Y1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.32■■□□□ 1
PCDH20Q8N6Y1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.32■■□□□ 1
PCDH20Q8N6Y1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.32■■□□□ 1
PCDH20Q8N6Y1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDH20Q8N6Y1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDH20Q8N6Y1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDH20Q8N6Y1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH20Q8N6Y1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH20Q8N6Y1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDH20Q8N6Y1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH20Q8N6Y1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH20Q8N6Y1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH20Q8N6Y1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDH20Q8N6Y1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.31■■□□□ 1
PCDH20Q8N6Y1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.31■■□□□ 1
PCDH20Q8N6Y1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH20Q8N6Y1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH20Q8N6Y1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH20Q8N6Y1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH20Q8N6Y1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH20Q8N6Y1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH20Q8N6Y1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH20Q8N6Y1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH20Q8N6Y1 FBXW4P1-201ENST00000426721 2239 ntBASIC21.31■■□□□ 1
PCDH20Q8N6Y1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH20Q8N6Y1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDH20Q8N6Y1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH20Q8N6Y1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDH20Q8N6Y1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDH20Q8N6Y1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH20Q8N6Y1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDH20Q8N6Y1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PCDH20Q8N6Y1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.3■■□□□ 1
PCDH20Q8N6Y1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.3■■□□□ 1
PCDH20Q8N6Y1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.3■■□□□ 1
PCDH20Q8N6Y1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.3■■□□□ 1
PCDH20Q8N6Y1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.3■■□□□ 1
PCDH20Q8N6Y1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
PCDH20Q8N6Y1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH20Q8N6Y1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDH20Q8N6Y1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.3■■□□□ 1
PCDH20Q8N6Y1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH20Q8N6Y1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms