Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPSF7Q8N684 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.39■□□□□ 0.85
CPSF7Q8N684 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.39■□□□□ 0.85
CPSF7Q8N684 IRS3P-201ENST00000223076 1006 ntBASIC20.39■□□□□ 0.85
CPSF7Q8N684 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.39■□□□□ 0.85
CPSF7Q8N684 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CPSF7Q8N684 AC010141.3-201ENST00000456659 717 ntBASIC20.39■□□□□ 0.85
CPSF7Q8N684 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CPSF7Q8N684 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.39■□□□□ 0.85
CPSF7Q8N684 AC087239.1-201ENST00000622671 572 ntBASIC20.39■□□□□ 0.85
CPSF7Q8N684 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.39■□□□□ 0.85
CPSF7Q8N684 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPSF7Q8N684 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.39■□□□□ 0.85
CPSF7Q8N684 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPSF7Q8N684 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPSF7Q8N684 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF7Q8N684 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF7Q8N684 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF7Q8N684 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF7Q8N684 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.38■□□□□ 0.85
CPSF7Q8N684 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF7Q8N684 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF7Q8N684 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF7Q8N684 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.38■□□□□ 0.85
CPSF7Q8N684 OR2I1P-207ENST00000453522 948 ntBASIC20.38■□□□□ 0.85
CPSF7Q8N684 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.38■□□□□ 0.85
CPSF7Q8N684 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.38■□□□□ 0.85
CPSF7Q8N684 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF7Q8N684 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF7Q8N684 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF7Q8N684 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CPSF7Q8N684 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPSF7Q8N684 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CPSF7Q8N684 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF7Q8N684 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.37■□□□□ 0.85
CPSF7Q8N684 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CPSF7Q8N684 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CPSF7Q8N684 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF7Q8N684 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.37■□□□□ 0.85
CPSF7Q8N684 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF7Q8N684 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CPSF7Q8N684 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF7Q8N684 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF7Q8N684 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CPSF7Q8N684 AC073314.1-201ENST00000568729 2216 ntBASIC20.37■□□□□ 0.85
CPSF7Q8N684 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.37■□□□□ 0.85
CPSF7Q8N684 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CPSF7Q8N684 AC126544.1-201ENST00000580842 1059 ntBASIC20.37■□□□□ 0.85
CPSF7Q8N684 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.37■□□□□ 0.85
CPSF7Q8N684 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF7Q8N684 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF7Q8N684 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF7Q8N684 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPSF7Q8N684 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPSF7Q8N684 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPSF7Q8N684 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.36■□□□□ 0.85
CPSF7Q8N684 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.36■□□□□ 0.85
CPSF7Q8N684 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
CPSF7Q8N684 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPSF7Q8N684 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPSF7Q8N684 SLC47A1P1-202ENST00000449666 945 ntBASIC20.36■□□□□ 0.85
CPSF7Q8N684 MIR5787-201ENST00000611784 55 ntBASIC20.36■□□□□ 0.85
CPSF7Q8N684 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPSF7Q8N684 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPSF7Q8N684 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.36■□□□□ 0.85
CPSF7Q8N684 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPSF7Q8N684 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPSF7Q8N684 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CPSF7Q8N684 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.35■□□□□ 0.85
CPSF7Q8N684 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.35■□□□□ 0.85
CPSF7Q8N684 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPSF7Q8N684 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPSF7Q8N684 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPSF7Q8N684 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CPSF7Q8N684 PLK5-205ENST00000642079 1969 ntBASIC20.35■□□□□ 0.85
CPSF7Q8N684 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPSF7Q8N684 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPSF7Q8N684 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPSF7Q8N684 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.35■□□□□ 0.85
CPSF7Q8N684 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPSF7Q8N684 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF7Q8N684 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF7Q8N684 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF7Q8N684 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF7Q8N684 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF7Q8N684 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CPSF7Q8N684 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.34■□□□□ 0.85
CPSF7Q8N684 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF7Q8N684 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF7Q8N684 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.34■□□□□ 0.85
CPSF7Q8N684 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF7Q8N684 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF7Q8N684 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
CPSF7Q8N684 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF7Q8N684 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF7Q8N684 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CPSF7Q8N684 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF7Q8N684 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CPSF7Q8N684 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.34■□□□□ 0.85
CPSF7Q8N684 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms