Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARFGEF3Q5TH69 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARFGEF3Q5TH69 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
ARFGEF3Q5TH69 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.79■□□□□ 0.44
ARFGEF3Q5TH69 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.79■□□□□ 0.44
ARFGEF3Q5TH69 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARFGEF3Q5TH69 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARFGEF3Q5TH69 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARFGEF3Q5TH69 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARFGEF3Q5TH69 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARFGEF3Q5TH69 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.78■□□□□ 0.44
ARFGEF3Q5TH69 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.78■□□□□ 0.44
ARFGEF3Q5TH69 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.78■□□□□ 0.44
ARFGEF3Q5TH69 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ARFGEF3Q5TH69 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARFGEF3Q5TH69 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARFGEF3Q5TH69 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
ARFGEF3Q5TH69 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ARFGEF3Q5TH69 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARFGEF3Q5TH69 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ARFGEF3Q5TH69 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.77■□□□□ 0.44
ARFGEF3Q5TH69 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.77■□□□□ 0.44
ARFGEF3Q5TH69 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.77■□□□□ 0.44
ARFGEF3Q5TH69 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.77■□□□□ 0.44
ARFGEF3Q5TH69 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.77■□□□□ 0.44
ARFGEF3Q5TH69 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.77■□□□□ 0.44
ARFGEF3Q5TH69 AC069236.1-201ENST00000604339 616 ntBASIC17.77■□□□□ 0.44
ARFGEF3Q5TH69 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ARFGEF3Q5TH69 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ARFGEF3Q5TH69 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ARFGEF3Q5TH69 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ARFGEF3Q5TH69 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ARFGEF3Q5TH69 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ARFGEF3Q5TH69 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ARFGEF3Q5TH69 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ARFGEF3Q5TH69 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ARFGEF3Q5TH69 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.77■□□□□ 0.43
ARFGEF3Q5TH69 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.77■□□□□ 0.43
ARFGEF3Q5TH69 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.77■□□□□ 0.43
ARFGEF3Q5TH69 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
ARFGEF3Q5TH69 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.43
ARFGEF3Q5TH69 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 DUSP5P2-201ENST00000426873 1033 ntBASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 BX276092.2-201ENST00000417668 665 ntBASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 CD99P1-205ENST00000527459 561 ntBASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 MYC-209ENST00000641252 345 ntBASIC17.76■□□□□ 0.43
ARFGEF3Q5TH69 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARFGEF3Q5TH69 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARFGEF3Q5TH69 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.75■□□□□ 0.43
ARFGEF3Q5TH69 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARFGEF3Q5TH69 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ARFGEF3Q5TH69 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARFGEF3Q5TH69 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARFGEF3Q5TH69 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARFGEF3Q5TH69 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ARFGEF3Q5TH69 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.75■□□□□ 0.43
ARFGEF3Q5TH69 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.75■□□□□ 0.43
ARFGEF3Q5TH69 AC008694.1-202ENST00000636953 945 ntBASIC17.75■□□□□ 0.43
ARFGEF3Q5TH69 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARFGEF3Q5TH69 AC010980.2-201ENST00000587099 1412 ntBASIC17.75■□□□□ 0.43
ARFGEF3Q5TH69 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.75■□□□□ 0.43
ARFGEF3Q5TH69 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARFGEF3Q5TH69 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ARFGEF3Q5TH69 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARFGEF3Q5TH69 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ARFGEF3Q5TH69 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ARFGEF3Q5TH69 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARFGEF3Q5TH69 AC007322.3-201ENST00000426526 701 ntBASIC17.74■□□□□ 0.43
ARFGEF3Q5TH69 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.74■□□□□ 0.43
ARFGEF3Q5TH69 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.74■□□□□ 0.43
ARFGEF3Q5TH69 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ARFGEF3Q5TH69 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARFGEF3Q5TH69 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARFGEF3Q5TH69 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARFGEF3Q5TH69 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARFGEF3Q5TH69 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARFGEF3Q5TH69 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARFGEF3Q5TH69 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARFGEF3Q5TH69 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
ARFGEF3Q5TH69 AC091799.1-201ENST00000422823 811 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms