Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 RPB9YGL070C 369 nt3.09□□□□□ -1.91
RPA49Q01080 YGR115CYGR115C 780 nt3.09□□□□□ -1.91
RPA49Q01080 DSE2YHR143W 978 nt3.09□□□□□ -1.91
RPA49Q01080 YJL169WYJL169W 369 nt3.09□□□□□ -1.91
RPA49Q01080 LSM8YJR022W 330 nt3.09□□□□□ -1.91
RPA49Q01080 YKL033W-AYKL033W-A 711 nt3.09□□□□□ -1.91
RPA49Q01080 OST6YML019W 999 nt3.09□□□□□ -1.91
RPA49Q01080 PRM6YML047C 1059 nt3.09□□□□□ -1.91
RPA49Q01080 YNL013CYNL013C 378 nt3.09□□□□□ -1.91
RPA49Q01080 SSN8YNL025C 972 nt3.09□□□□□ -1.91
RPA49Q01080 SAS5YOR213C 747 nt3.09□□□□□ -1.91
RPA49Q01080 ILS1YBL076C 3219 nt3.09□□□□□ -1.92
RPA49Q01080 NUR1YDL089W 1455 nt3.09□□□□□ -1.92
RPA49Q01080 FUS2YMR232W 2034 nt3.09□□□□□ -1.92
RPA49Q01080 RIX1YHR197W 2292 nt3.08□□□□□ -1.92
RPA49Q01080 SKP2YNL311C 2292 nt3.08□□□□□ -1.92
RPA49Q01080 TOM70YNL121C 1854 nt3.08□□□□□ -1.92
RPA49Q01080 STE2YFL026W 1296 nt3.08□□□□□ -1.92
RPA49Q01080 QCR10YHR001W-A 234 nt3.08□□□□□ -1.92
RPA49Q01080 YAL016C-BYAL016C-B 186 nt3.08□□□□□ -1.92
RPA49Q01080 TPK3YKL166C 1197 nt3.08□□□□□ -1.92
RPA49Q01080 YAL064W-BYAL064W-B 381 nt3.08□□□□□ -1.92
RPA49Q01080 ENV10YLR065C 546 nt3.08□□□□□ -1.92
RPA49Q01080 GIM5YML094W 492 nt3.08□□□□□ -1.92
RPA49Q01080 PDR17YNL264C 1053 nt3.08□□□□□ -1.92
RPA49Q01080 SME1YOR159C 285 nt3.08□□□□□ -1.92
RPA49Q01080 PMR1YGL167C 2853 nt3.08□□□□□ -1.92
RPA49Q01080 JIP5YPR169W 1479 nt3.08□□□□□ -1.92
RPA49Q01080 PFK26YIL107C 2484 nt3.08□□□□□ -1.92
RPA49Q01080 KHA1YJL094C 2622 nt3.07□□□□□ -1.92
RPA49Q01080 HOP1YIL072W 1818 nt3.07□□□□□ -1.92
RPA49Q01080 EXO84YBR102C 2262 nt3.07□□□□□ -1.92
RPA49Q01080 YDL032WYDL032W 312 nt3.07□□□□□ -1.92
RPA49Q01080 CPR5YDR304C 678 nt3.07□□□□□ -1.92
RPA49Q01080 YER039C-AYER039C-A 219 nt3.07□□□□□ -1.92
RPA49Q01080 NSA2YER126C 786 nt3.07□□□□□ -1.92
RPA49Q01080 YKE2YLR200W 345 nt3.07□□□□□ -1.92
RPA49Q01080 COX14YML129C 213 nt3.07□□□□□ -1.92
RPA49Q01080 snR24snR24 89 nt3.07□□□□□ -1.92
RPA49Q01080 TCP1YDR212W 1680 nt3.07□□□□□ -1.92
RPA49Q01080 PDS5YMR076C 3834 nt3.06□□□□□ -1.92
RPA49Q01080 AST2YER101C 1293 nt3.06□□□□□ -1.92
RPA49Q01080 YLR154C-HYLR154C-H 132 nt3.06□□□□□ -1.92
RPA49Q01080 YLR156C-AYLR156C-A 132 nt3.06□□□□□ -1.92
RPA49Q01080 YLR157C-CYLR157C-C 132 nt3.06□□□□□ -1.92
RPA49Q01080 YLR159C-AYLR159C-A 132 nt3.06□□□□□ -1.92
RPA49Q01080 CIK1YMR198W 1785 nt3.06□□□□□ -1.92
RPA49Q01080 DYN3YMR299C 939 nt3.06□□□□□ -1.92
RPA49Q01080 RPL20BYOR312C 519 nt3.06□□□□□ -1.92
RPA49Q01080 RXT2YBR095C 1293 nt3.06□□□□□ -1.92
RPA49Q01080 MED8YBR193C 672 nt3.06□□□□□ -1.92
RPA49Q01080 TCB2YNL087W 3537 nt3.06□□□□□ -1.92
RPA49Q01080 DIA2YOR080W 2199 nt3.05□□□□□ -1.92
RPA49Q01080 URB2YJR041C 3525 nt3.05□□□□□ -1.92
RPA49Q01080 NSA1YGL111W 1392 nt3.05□□□□□ -1.92
RPA49Q01080 YDR210W-BYDR210W-B 5313 nt3.05□□□□□ -1.92
RPA49Q01080 YDR261W-BYDR261W-B 5313 nt3.05□□□□□ -1.92
RPA49Q01080 YFL002W-AYFL002W-A 5313 nt3.05□□□□□ -1.92
RPA49Q01080 YGR161W-BYGR161W-B 5313 nt3.05□□□□□ -1.92
RPA49Q01080 YLR410W-BYLR410W-B 5313 nt3.05□□□□□ -1.92
RPA49Q01080 YCL019WYCL019W 5313 nt3.05□□□□□ -1.92
RPA49Q01080 RAV2YDR202C 1056 nt3.05□□□□□ -1.92
RPA49Q01080 YER046W-AYER046W-A 330 nt3.05□□□□□ -1.92
RPA49Q01080 YPL107WYPL107W 747 nt3.05□□□□□ -1.92
RPA49Q01080 RPL33AYPL143W 324 nt3.05□□□□□ -1.92
RPA49Q01080 ATP20YPR020W 348 nt3.05□□□□□ -1.92
RPA49Q01080 RRP15YPR143W 753 nt3.05□□□□□ -1.92
RPA49Q01080 RIM13YMR154C 2184 nt3.05□□□□□ -1.92
RPA49Q01080 SMC2YFR031C 3513 nt3.05□□□□□ -1.92
RPA49Q01080 CDH1YGL003C 1701 nt3.05□□□□□ -1.92
RPA49Q01080 STP2YHR006W 1626 nt3.04□□□□□ -1.92
RPA49Q01080 RAD18YCR066W 1464 nt3.04□□□□□ -1.92
RPA49Q01080 SOK1YDR006C 2706 nt3.04□□□□□ -1.92
RPA49Q01080 DUF1YOL087C 3351 nt3.04□□□□□ -1.92
RPA49Q01080 SKO1YNL167C 1944 nt3.04□□□□□ -1.92
RPA49Q01080 EMI1YDR512C 564 nt3.04□□□□□ -1.92
RPA49Q01080 YGL039WYGL039W 1047 nt3.04□□□□□ -1.92
RPA49Q01080 YGL109WYGL109W 324 nt3.04□□□□□ -1.92
RPA49Q01080 PEF1YGR058W 1008 nt3.04□□□□□ -1.92
RPA49Q01080 ATG27YJL178C 816 nt3.04□□□□□ -1.92
RPA49Q01080 RRG7YOR305W 729 nt3.04□□□□□ -1.92
RPA49Q01080 MRPL40YPL173W 894 nt3.04□□□□□ -1.92
RPA49Q01080 SWD3YBR175W 948 nt3.04□□□□□ -1.92
RPA49Q01080 AIM4YBR194W 372 nt3.04□□□□□ -1.92
RPA49Q01080 SHG1YBR258C 429 nt3.04□□□□□ -1.92
RPA49Q01080 ORC1YML065W 2745 nt3.04□□□□□ -1.92
RPA49Q01080 ITC1YGL133W 3795 nt3.04□□□□□ -1.92
RPA49Q01080 AI2Q0055 2565 nt3.04□□□□□ -1.92
RPA49Q01080 SRD1YCR018C 666 nt3.03□□□□□ -1.92
RPA49Q01080 HMO1YDR174W 741 nt3.03□□□□□ -1.92
RPA49Q01080 HLR1YDR528W 1272 nt3.03□□□□□ -1.92
RPA49Q01080 YFL012WYFL012W 447 nt3.03□□□□□ -1.92
RPA49Q01080 LOC1YFR001W 615 nt3.03□□□□□ -1.92
RPA49Q01080 TAD1YGL243W 1203 nt3.03□□□□□ -1.92
RPA49Q01080 VEL1YGL258W 621 nt3.03□□□□□ -1.92
RPA49Q01080 THG1YGR024C 714 nt3.03□□□□□ -1.92
RPA49Q01080 MVB12YGR206W 306 nt3.03□□□□□ -1.92
RPA49Q01080 LIN1YHR156C 1023 nt3.03□□□□□ -1.92
RPA49Q01080 DLS1YJL065C 504 nt3.03□□□□□ -1.92
RPA49Q01080 YAL031W-AYAL031W-A 309 nt3.03□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 36.4 ms