Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXCR4P61073 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXCR4P61073 AC006455.2-201ENST00000429931 906 ntBASIC19.05■□□□□ 0.64
CXCR4P61073 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
CXCR4P61073 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.05■□□□□ 0.64
CXCR4P61073 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.05■□□□□ 0.64
CXCR4P61073 pRNA.6-201ENST00000610482 90 ntBASIC19.05■□□□□ 0.64
CXCR4P61073 pRNA.5-201ENST00000612139 90 ntBASIC19.05■□□□□ 0.64
CXCR4P61073 pRNA.11-201ENST00000618423 90 ntBASIC19.05■□□□□ 0.64
CXCR4P61073 pRNA.13-201ENST00000619112 90 ntBASIC19.05■□□□□ 0.64
CXCR4P61073 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.05■□□□□ 0.64
CXCR4P61073 BX323043.1-201ENST00000641006 1765 ntBASIC19.05■□□□□ 0.64
CXCR4P61073 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXCR4P61073 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXCR4P61073 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CXCR4P61073 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXCR4P61073 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.05■□□□□ 0.64
CXCR4P61073 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXCR4P61073 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.04■□□□□ 0.64
CXCR4P61073 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CXCR4P61073 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CXCR4P61073 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.04■□□□□ 0.64
CXCR4P61073 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CXCR4P61073 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.04■□□□□ 0.64
CXCR4P61073 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.04■□□□□ 0.64
CXCR4P61073 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.04■□□□□ 0.64
CXCR4P61073 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CXCR4P61073 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.04■□□□□ 0.64
CXCR4P61073 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CXCR4P61073 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CXCR4P61073 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CXCR4P61073 AC007225.1-201ENST00000566331 1836 ntBASIC19.04■□□□□ 0.64
CXCR4P61073 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CXCR4P61073 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
CXCR4P61073 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.04■□□□□ 0.64
CXCR4P61073 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXCR4P61073 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
CXCR4P61073 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CXCR4P61073 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.03■□□□□ 0.64
CXCR4P61073 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXCR4P61073 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXCR4P61073 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXCR4P61073 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXCR4P61073 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CXCR4P61073 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXCR4P61073 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CXCR4P61073 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CXCR4P61073 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CXCR4P61073 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXCR4P61073 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.03■□□□□ 0.64
CXCR4P61073 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CXCR4P61073 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXCR4P61073 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.03■□□□□ 0.64
CXCR4P61073 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CXCR4P61073 AL020996.1-203ENST00000536896 2307 ntBASIC19.02■□□□□ 0.64
CXCR4P61073 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.02■□□□□ 0.64
CXCR4P61073 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
CXCR4P61073 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.02■□□□□ 0.64
CXCR4P61073 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CXCR4P61073 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CXCR4P61073 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CXCR4P61073 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CXCR4P61073 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CXCR4P61073 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CXCR4P61073 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CXCR4P61073 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.02■□□□□ 0.63
CXCR4P61073 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CXCR4P61073 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXCR4P61073 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXCR4P61073 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXCR4P61073 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXCR4P61073 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXCR4P61073 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CXCR4P61073 AC121338.2-201ENST00000622535 1744 ntBASIC19.01■□□□□ 0.63
CXCR4P61073 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.01■□□□□ 0.63
CXCR4P61073 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.01■□□□□ 0.63
CXCR4P61073 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.01■□□□□ 0.63
CXCR4P61073 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXCR4P61073 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXCR4P61073 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXCR4P61073 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXCR4P61073 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXCR4P61073 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXCR4P61073 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXCR4P61073 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
CXCR4P61073 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CXCR4P61073 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CXCR4P61073 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CXCR4P61073 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19■□□□□ 0.63
CXCR4P61073 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19■□□□□ 0.63
CXCR4P61073 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CXCR4P61073 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19■□□□□ 0.63
CXCR4P61073 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CXCR4P61073 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CXCR4P61073 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19■□□□□ 0.63
CXCR4P61073 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CXCR4P61073 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CXCR4P61073 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19■□□□□ 0.63
CXCR4P61073 KRT16P3-201ENST00000439127 1283 ntBASIC19■□□□□ 0.63
CXCR4P61073 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms