Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 YDR365W-BYDR365W-B 5268 nt2.6□□□□□ -1.99
YNL040WP53960 YER138CYER138C 5268 nt2.6□□□□□ -1.99
YNL040WP53960 YER160CYER160C 5268 nt2.6□□□□□ -1.99
YNL040WP53960 YGR038C-BYGR038C-B 5268 nt2.6□□□□□ -1.99
YNL040WP53960 YGR161C-DYGR161C-D 5268 nt2.6□□□□□ -1.99
YNL040WP53960 YJR027WYJR027W 5268 nt2.6□□□□□ -1.99
YNL040WP53960 YLR157C-BYLR157C-B 5268 nt2.6□□□□□ -1.99
YNL040WP53960 YML039WYML039W 5268 nt2.6□□□□□ -1.99
YNL040WP53960 YML045WYML045W 5268 nt2.6□□□□□ -1.99
YNL040WP53960 YMR050CYMR050C 5268 nt2.6□□□□□ -1.99
YNL040WP53960 YOL103W-BYOL103W-B 5268 nt2.6□□□□□ -1.99
YNL040WP53960 YBR012W-BYBR012W-B 5271 nt2.6□□□□□ -1.99
YNL040WP53960 YOR142W-BYOR142W-B 5268 nt2.6□□□□□ -1.99
YNL040WP53960 YPL257W-BYPL257W-B 5268 nt2.6□□□□□ -1.99
YNL040WP53960 YPR158W-BYPR158W-B 5271 nt2.6□□□□□ -1.99
YNL040WP53960 YDR034C-CYDR034C-C 1317 nt2.6□□□□□ -1.99
YNL040WP53960 YLR410W-AYLR410W-A 1317 nt2.6□□□□□ -1.99
YNL040WP53960 BNI4YNL233W 2679 nt2.59□□□□□ -1.99
YNL040WP53960 SRP68YPL243W 1800 nt2.59□□□□□ -1.99
YNL040WP53960 NUM1YDR150W 8247 nt2.59□□□□□ -1.99
YNL040WP53960 UTP15YMR093W 1542 nt2.59□□□□□ -1.99
YNL040WP53960 CSF1YLR087C 8877 nt2.59□□□□□ -1.99
YNL040WP53960 PIB1YDR313C 861 nt2.59□□□□□ -1.99
YNL040WP53960 YEL057CYEL057C 702 nt2.59□□□□□ -1.99
YNL040WP53960 YOR050CYOR050C 348 nt2.59□□□□□ -1.99
YNL040WP53960 AME1YBR211C 975 nt2.59□□□□□ -1.99
YNL040WP53960 YCK2YNL154C 1641 nt2.59□□□□□ -1.99
YNL040WP53960 SAD1YFR005C 1347 nt2.59□□□□□ -2
YNL040WP53960 MLH1YMR167W 2310 nt2.59□□□□□ -2
YNL040WP53960 NAB6YML117W 3405 nt2.59□□□□□ -2
YNL040WP53960 PDC2YDR081C 2778 nt2.59□□□□□ -2
YNL040WP53960 NEW1YPL226W 3591 nt2.59□□□□□ -2
YNL040WP53960 MDM10YAL010C 1482 nt2.58□□□□□ -2
YNL040WP53960 YDR210W-BYDR210W-B 5313 nt2.58□□□□□ -2
YNL040WP53960 YDR261W-BYDR261W-B 5313 nt2.58□□□□□ -2
YNL040WP53960 YFL002W-AYFL002W-A 5313 nt2.58□□□□□ -2
YNL040WP53960 YGR161W-BYGR161W-B 5313 nt2.58□□□□□ -2
YNL040WP53960 YLR410W-BYLR410W-B 5313 nt2.58□□□□□ -2
YNL040WP53960 YCL019WYCL019W 5313 nt2.58□□□□□ -2
YNL040WP53960 CDC55YGL190C 1581 nt2.58□□□□□ -2
YNL040WP53960 ART10YLR392C 1557 nt2.58□□□□□ -2
YNL040WP53960 AI3Q0060 1248 nt2.58□□□□□ -2
YNL040WP53960 LSM4YER112W 564 nt2.58□□□□□ -2
YNL040WP53960 CUP1-1YHR053C 186 nt2.58□□□□□ -2
YNL040WP53960 CUP1-2YHR055C 186 nt2.58□□□□□ -2
YNL040WP53960 YMR194C-AYMR194C-A 225 nt2.58□□□□□ -2
YNL040WP53960 YOL162WYOL162W 648 nt2.58□□□□□ -2
YNL040WP53960 SWC4YGR002C 1431 nt2.58□□□□□ -2
YNL040WP53960 AI4Q0065 1671 nt2.57□□□□□ -2
YNL040WP53960 UBC9YDL064W 474 nt2.57□□□□□ -2
YNL040WP53960 PEX14YGL153W 1026 nt2.57□□□□□ -2
YNL040WP53960 YGL204CYGL204C 306 nt2.57□□□□□ -2
YNL040WP53960 YGR111WYGR111W 1203 nt2.57□□□□□ -2
YNL040WP53960 PEX15YOL044W 1152 nt2.57□□□□□ -2
YNL040WP53960 RPL36BYPL249C-A 303 nt2.57□□□□□ -2
YNL040WP53960 YBR209WYBR209W 318 nt2.57□□□□□ -2
YNL040WP53960 PUF6YDR496C 1971 nt2.57□□□□□ -2
YNL040WP53960 AVT5YBL089W 1380 nt2.57□□□□□ -2
YNL040WP53960 BNR1YIL159W 4128 nt2.57□□□□□ -2
YNL040WP53960 NET1YJL076W 3570 nt2.56□□□□□ -2
YNL040WP53960 PSK1YAL017W 4071 nt2.56□□□□□ -2
YNL040WP53960 MMS1YPR164W 4224 nt2.56□□□□□ -2
YNL040WP53960 COBQ0105 1158 nt2.56□□□□□ -2
YNL040WP53960 RPB9YGL070C 369 nt2.56□□□□□ -2
YNL040WP53960 YIR021W-AYIR021W-A 213 nt2.56□□□□□ -2
YNL040WP53960 POL32YJR043C 1053 nt2.56□□□□□ -2
YNL040WP53960 NNF1YJR112W 606 nt2.56□□□□□ -2
YNL040WP53960 EMC6YLL014W 327 nt2.56□□□□□ -2
YNL040WP53960 DIA1YMR316W 1011 nt2.56□□□□□ -2
YNL040WP53960 TSR4YOL022C 1227 nt2.56□□□□□ -2
YNL040WP53960 YBL108WYBL108W 306 nt2.56□□□□□ -2
YNL040WP53960 PET20YPL159C 762 nt2.56□□□□□ -2
YNL040WP53960 LTP1YPR073C 486 nt2.56□□□□□ -2
YNL040WP53960 snR43snR43 209 nt2.56□□□□□ -2
YNL040WP53960 MAK11YKL021C 1407 nt2.56□□□□□ -2
YNL040WP53960 ADY4YLR227C 1482 nt2.56□□□□□ -2
YNL040WP53960 SKT5YBL061C 2091 nt2.56□□□□□ -2
YNL040WP53960 CWH41YGL027C 2502 nt2.56□□□□□ -2
YNL040WP53960 POL4YCR014C 1749 nt2.55□□□□□ -2
YNL040WP53960 SYO1YDL063C 1863 nt2.55□□□□□ -2
YNL040WP53960 LSM8YJR022W 330 nt2.55□□□□□ -2
YNL040WP53960 CMC1YKL137W 336 nt2.55□□□□□ -2
YNL040WP53960 BET3YKR068C 582 nt2.55□□□□□ -2
YNL040WP53960 YLR285C-AYLR285C-A 171 nt2.55□□□□□ -2
YNL040WP53960 YLR365WYLR365W 333 nt2.55□□□□□ -2
YNL040WP53960 PDR3YBL005W 2931 nt2.55□□□□□ -2
YNL040WP53960 SWD3YBR175W 948 nt2.55□□□□□ -2
YNL040WP53960 APA1YCL050C 966 nt2.55□□□□□ -2
YNL040WP53960 SVL3YPL032C 2478 nt2.54□□□□□ -2
YNL040WP53960 YKL100CYKL100C 1764 nt2.54□□□□□ -2
YNL040WP53960 VHR2YER064C 1518 nt2.54□□□□□ -2
YNL040WP53960 RPL13AYDL082W 600 nt2.54□□□□□ -2
YNL040WP53960 FSH1YHR049W 732 nt2.54□□□□□ -2
YNL040WP53960 YIL156W-BYIL156W-B 222 nt2.54□□□□□ -2
YNL040WP53960 ERV41YML067C 1059 nt2.54□□□□□ -2
YNL040WP53960 YNL203CYNL203C 612 nt2.54□□□□□ -2
YNL040WP53960 DCP1YOL149W 696 nt2.54□□□□□ -2
YNL040WP53960 SRL1YOR247W 633 nt2.54□□□□□ -2
YNL040WP53960 SKO1YNL167C 1944 nt2.54□□□□□ -2
YNL040WP53960 MED1YPR070W 1701 nt2.54□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 27.5 ms