Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ACLYP53396 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
ACLYP53396 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
ACLYP53396 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ACLYP53396 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.22■■□□□ 1.31
ACLYP53396 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.22■■□□□ 1.31
ACLYP53396 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.22■■□□□ 1.31
ACLYP53396 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.22■■□□□ 1.31
ACLYP53396 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.22■■□□□ 1.31
ACLYP53396 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
ACLYP53396 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ACLYP53396 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
ACLYP53396 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ACLYP53396 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ACLYP53396 AC093323.1-202ENST00000635031 2045 ntBASIC23.21■■□□□ 1.31
ACLYP53396 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
ACLYP53396 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ACLYP53396 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.21■■□□□ 1.31
ACLYP53396 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.21■■□□□ 1.31
ACLYP53396 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.21■■□□□ 1.31
ACLYP53396 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.21■■□□□ 1.31
ACLYP53396 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.21■■□□□ 1.31
ACLYP53396 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.21■■□□□ 1.31
ACLYP53396 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ACLYP53396 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ACLYP53396 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.2■■□□□ 1.3
ACLYP53396 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
ACLYP53396 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.2■■□□□ 1.3
ACLYP53396 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ACLYP53396 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.2■■□□□ 1.3
ACLYP53396 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ACLYP53396 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ACLYP53396 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ACLYP53396 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.2■■□□□ 1.3
ACLYP53396 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.2■■□□□ 1.3
ACLYP53396 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ACLYP53396 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
ACLYP53396 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.2■■□□□ 1.3
ACLYP53396 SOX15-203ENST00000570788 1093 ntBASIC23.2■■□□□ 1.3
ACLYP53396 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.2■■□□□ 1.3
ACLYP53396 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ACLYP53396 AC073912.3-201ENST00000624414 853 ntBASIC23.2■■□□□ 1.3
ACLYP53396 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.2■■□□□ 1.3
ACLYP53396 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.2■■□□□ 1.3
ACLYP53396 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
ACLYP53396 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ACLYP53396 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.19■■□□□ 1.3
ACLYP53396 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
ACLYP53396 ECEL1P3-201ENST00000427961 737 ntBASIC23.19■■□□□ 1.3
ACLYP53396 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.19■■□□□ 1.3
ACLYP53396 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ACLYP53396 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
ACLYP53396 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.19■■□□□ 1.3
ACLYP53396 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.19■■□□□ 1.3
ACLYP53396 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.19■■□□□ 1.3
ACLYP53396 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.19■■□□□ 1.3
ACLYP53396 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
ACLYP53396 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.19■■□□□ 1.3
ACLYP53396 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
ACLYP53396 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.19■■□□□ 1.3
ACLYP53396 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.19■■□□□ 1.3
ACLYP53396 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ACLYP53396 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ACLYP53396 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ACLYP53396 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ACLYP53396 C11orf96-202ENST00000528572 1834 ntBASIC23.18■■□□□ 1.3
ACLYP53396 AC092053.2-201ENST00000640557 1818 ntBASIC23.18■■□□□ 1.3
ACLYP53396 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ACLYP53396 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ACLYP53396 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.18■■□□□ 1.3
ACLYP53396 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ACLYP53396 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ACLYP53396 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.18■■□□□ 1.3
ACLYP53396 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
ACLYP53396 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.18■■□□□ 1.3
ACLYP53396 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.18■■□□□ 1.3
ACLYP53396 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.18■■□□□ 1.3
ACLYP53396 AC069544.1-201ENST00000609399 999 ntBASIC23.18■■□□□ 1.3
ACLYP53396 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.18■■□□□ 1.3
ACLYP53396 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
ACLYP53396 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.17■■□□□ 1.3
ACLYP53396 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
ACLYP53396 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.17■■□□□ 1.3
ACLYP53396 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ACLYP53396 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.17■■□□□ 1.3
ACLYP53396 SNORA78-201ENST00000459373 127 ntBASIC23.17■■□□□ 1.3
ACLYP53396 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
ACLYP53396 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.17■■□□□ 1.3
ACLYP53396 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
ACLYP53396 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.17■■□□□ 1.3
ACLYP53396 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.17■■□□□ 1.3
ACLYP53396 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.17■■□□□ 1.3
ACLYP53396 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
ACLYP53396 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.17■■□□□ 1.3
ACLYP53396 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.17■■□□□ 1.3
ACLYP53396 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ACLYP53396 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.16■■□□□ 1.3
ACLYP53396 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
ACLYP53396 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
ACLYP53396 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms