Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	SPT23	YKL020C	3249 nt		3.8	□□□□□ -1.8
CAF16	P43569	FKH2	YNL068C	2589 nt		3.8	□□□□□ -1.8
CAF16	P43569	CDC40	YDR364C	1368 nt		3.8	□□□□□ -1.8
CAF16	P43569	RED1	YLR263W	2484 nt		3.8	□□□□□ -1.8
CAF16	P43569	FLO10	YKR102W	3510 nt		3.8	□□□□□ -1.8
CAF16	P43569	OPI6	YDL096C	327 nt		3.8	□□□□□ -1.8
CAF16	P43569	API2	YDR525W	330 nt		3.8	□□□□□ -1.8
CAF16	P43569	FMP10	YER182W	735 nt		3.8	□□□□□ -1.8
CAF16	P43569	COX2	Q0250	756 nt		3.8	□□□□□ -1.8
CAF16	P43569	ECM4	YKR076W	1113 nt		3.8	□□□□□ -1.8
CAF16	P43569	DAD2	YKR083C	402 nt		3.8	□□□□□ -1.8
CAF16	P43569	YAR019W-A	YAR019W-A	333 nt		3.8	□□□□□ -1.8
CAF16	P43569	YMR013C-A	YMR013C-A	150 nt		3.8	□□□□□ -1.8
CAF16	P43569	YOR277C	YOR277C	309 nt		3.8	□□□□□ -1.8
CAF16	P43569	LEE1	YPL054W	906 nt		3.8	□□□□□ -1.8
CAF16	P43569	MRPL40	YPL173W	894 nt		3.8	□□□□□ -1.8
CAF16	P43569	MRPS9	YBR146W	837 nt		3.8	□□□□□ -1.8
CAF16	P43569	AIM4	YBR194W	372 nt		3.8	□□□□□ -1.8
CAF16	P43569	SSF1	YHR066W	1362 nt		3.79	□□□□□ -1.8
CAF16	P43569	LCB5	YLR260W	2064 nt		3.79	□□□□□ -1.8
CAF16	P43569	RPS13	YDR064W	456 nt		3.79	□□□□□ -1.8
CAF16	P43569	CDC26	YFR036W	375 nt		3.79	□□□□□ -1.8
CAF16	P43569	YGL015C	YGL015C	393 nt		3.79	□□□□□ -1.8
CAF16	P43569	YLR406C-A	YLR406C-A	150 nt		3.79	□□□□□ -1.8
CAF16	P43569	PDR17	YNL264C	1053 nt		3.79	□□□□□ -1.8
CAF16	P43569	SSO1	YPL232W	873 nt		3.79	□□□□□ -1.8
CAF16	P43569	MAK5	YBR142W	2322 nt		3.79	□□□□□ -1.8
CAF16	P43569	SAP4	YGL229C	2457 nt		3.79	□□□□□ -1.8
CAF16	P43569	TMA108	YIL137C	2841 nt		3.78	□□□□□ -1.8
CAF16	P43569	EMI1	YDR512C	564 nt		3.78	□□□□□ -1.8
CAF16	P43569	IES5	YER092W	378 nt		3.78	□□□□□ -1.8
CAF16	P43569	GET1	YGL020C	708 nt		3.78	□□□□□ -1.8
CAF16	P43569	VEL1	YGL258W	621 nt		3.78	□□□□□ -1.8
CAF16	P43569	RPB3	YIL021W	957 nt		3.78	□□□□□ -1.8
CAF16	P43569	LSO1	YJR005C-A	282 nt		3.78	□□□□□ -1.8
CAF16	P43569	CWC24	YLR323C	780 nt		3.78	□□□□□ -1.8
CAF16	P43569	YLR416C	YLR416C	399 nt		3.78	□□□□□ -1.8
CAF16	P43569	YMR153C-A	YMR153C-A	336 nt		3.78	□□□□□ -1.8
CAF16	P43569	YMR304C-A	YMR304C-A	351 nt		3.78	□□□□□ -1.8
CAF16	P43569	CAT5	YOR125C	702 nt		3.78	□□□□□ -1.8
CAF16	P43569	NTC20	YBR188C	423 nt		3.78	□□□□□ -1.8
CAF16	P43569	CWH41	YGL027C	2502 nt		3.78	□□□□□ -1.8
CAF16	P43569	SWI1	YPL016W	3945 nt		3.77	□□□□□ -1.81
CAF16	P43569	YRM1	YOR172W	2361 nt		3.77	□□□□□ -1.81
CAF16	P43569	FRE8	YLR047C	2061 nt		3.77	□□□□□ -1.81
CAF16	P43569	PHM7	YOL084W	2976 nt		3.77	□□□□□ -1.81
CAF16	P43569	ARG82	YDR173C	1068 nt		3.77	□□□□□ -1.81
CAF16	P43569	SNA2	YDR525W-A	240 nt		3.77	□□□□□ -1.81
CAF16	P43569	YEL032C-A	YEL032C-A	162 nt		3.77	□□□□□ -1.81
CAF16	P43569	HUR1	YGL168W	333 nt		3.77	□□□□□ -1.81
CAF16	P43569	COX8	YLR395C	237 nt		3.77	□□□□□ -1.81
CAF16	P43569	DDR48	YMR173W	1293 nt		3.77	□□□□□ -1.81
CAF16	P43569	PIS1	YPR113W	663 nt		3.77	□□□□□ -1.81
CAF16	P43569	RPB2	YOR151C	3675 nt		3.77	□□□□□ -1.81
CAF16	P43569	PTA1	YAL043C	2358 nt		3.76	□□□□□ -1.81
CAF16	P43569	ARG2	YJL071W	1725 nt		3.76	□□□□□ -1.81
CAF16	P43569	BI4	Q0120	1917 nt		3.76	□□□□□ -1.81
CAF16	P43569	GRS2	YPR081C	1857 nt		3.76	□□□□□ -1.81
CAF16	P43569	AIM11	YER093C-A	414 nt		3.76	□□□□□ -1.81
CAF16	P43569	RPL1B	YGL135W	654 nt		3.76	□□□□□ -1.81
CAF16	P43569	ARO2	YGL148W	1131 nt		3.76	□□□□□ -1.81
CAF16	P43569	YPL142C	YPL142C	318 nt		3.76	□□□□□ -1.81
CAF16	P43569	RPL1A	YPL220W	654 nt		3.76	□□□□□ -1.81
CAF16	P43569	YPR059C	YPR059C	387 nt		3.76	□□□□□ -1.81
CAF16	P43569	YBR076C-A	YBR076C-A	267 nt		3.76	□□□□□ -1.81
CAF16	P43569	ERB1	YMR049C	2424 nt		3.76	□□□□□ -1.81
CAF16	P43569	TUB2	YFL037W	1374 nt		3.76	□□□□□ -1.81
CAF16	P43569	YGR237C	YGR237C	2358 nt		3.75	□□□□□ -1.81
CAF16	P43569	YCR064C	YCR064C	411 nt		3.75	□□□□□ -1.81
CAF16	P43569	AHC2	YCR082W	387 nt		3.75	□□□□□ -1.81
CAF16	P43569	YDL176W	YDL176W	2127 nt		3.75	□□□□□ -1.81
CAF16	P43569	YGL152C	YGL152C	678 nt		3.75	□□□□□ -1.81
CAF16	P43569	IES3	YLR052W	753 nt		3.75	□□□□□ -1.81
CAF16	P43569	YNL181W	YNL181W	1224 nt		3.75	□□□□□ -1.81
CAF16	P43569	RIO2	YNL207W	1278 nt		3.75	□□□□□ -1.81
CAF16	P43569	YKR078W	YKR078W	1758 nt		3.75	□□□□□ -1.81
CAF16	P43569	TAF6	YGL112C	1551 nt		3.75	□□□□□ -1.81
CAF16	P43569	ZDS1	YMR273C	2748 nt		3.75	□□□□□ -1.81
CAF16	P43569	DBF20	YPR111W	1695 nt		3.75	□□□□□ -1.81
CAF16	P43569	UBP5	YER144C	2418 nt		3.74	□□□□□ -1.81
CAF16	P43569	YDL009C	YDL009C	324 nt		3.74	□□□□□ -1.81
CAF16	P43569	YDR526C	YDR526C	471 nt		3.74	□□□□□ -1.81
CAF16	P43569	YGR053C	YGR053C	852 nt		3.74	□□□□□ -1.81
CAF16	P43569	YHL009W-A	YHL009W-A	1242 nt		3.74	□□□□□ -1.81
CAF16	P43569	MUD2	YKL074C	1584 nt		3.74	□□□□□ -1.81
CAF16	P43569	RPL15A	YLR029C	615 nt		3.74	□□□□□ -1.81
CAF16	P43569	ILV5	YLR355C	1188 nt		3.74	□□□□□ -1.81
CAF16	P43569	CCM1	YGR150C	2595 nt		3.74	□□□□□ -1.81
CAF16	P43569	HOP1	YIL072W	1818 nt		3.74	□□□□□ -1.81
CAF16	P43569	ATP25	YMR098C	1839 nt		3.74	□□□□□ -1.81
CAF16	P43569	PPQ1	YPL179W	1650 nt		3.74	□□□□□ -1.81
CAF16	P43569	ICR1	ICR1	3199 nt		3.73	□□□□□ -1.81
CAF16	P43569	YDR149C	YDR149C	708 nt		3.73	□□□□□ -1.81
CAF16	P43569	RTT105	YER104W	627 nt		3.73	□□□□□ -1.81
CAF16	P43569	VPS29	YHR012W	849 nt		3.73	□□□□□ -1.81
CAF16	P43569	MCR1	YKL150W	909 nt		3.73	□□□□□ -1.81
CAF16	P43569	AIM29	YKR074W	468 nt		3.73	□□□□□ -1.81
CAF16	P43569	ADI1	YMR009W	540 nt		3.73	□□□□□ -1.81
CAF16	P43569	YPR053C	YPR053C	456 nt		3.73	□□□□□ -1.81
CAF16	P43569	YBR209W	YBR209W	318 nt		3.73	□□□□□ -1.81

Retrieved 100 of 7,029 protein–RNA pairs in 16.1 ms