Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MTHFRP42898 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MTHFRP42898 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MTHFRP42898 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MTHFRP42898 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MTHFRP42898 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
MTHFRP42898 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MTHFRP42898 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
MTHFRP42898 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MTHFRP42898 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
MTHFRP42898 AL355472.2-201ENST00000422958 438 ntBASIC21.93■■□□□ 1.1
MTHFRP42898 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.93■■□□□ 1.1
MTHFRP42898 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MTHFRP42898 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
MTHFRP42898 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MTHFRP42898 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.93■■□□□ 1.1
MTHFRP42898 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MTHFRP42898 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.93■■□□□ 1.1
MTHFRP42898 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
MTHFRP42898 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MTHFRP42898 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
MTHFRP42898 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MTHFRP42898 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
MTHFRP42898 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
MTHFRP42898 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.92■■□□□ 1.1
MTHFRP42898 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.92■■□□□ 1.1
MTHFRP42898 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.92■■□□□ 1.1
MTHFRP42898 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.92■■□□□ 1.1
MTHFRP42898 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.92■■□□□ 1.1
MTHFRP42898 CYP2T3P-201ENST00000601990 817 ntBASIC21.92■■□□□ 1.1
MTHFRP42898 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.92■■□□□ 1.1
MTHFRP42898 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.92■■□□□ 1.1
MTHFRP42898 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MTHFRP42898 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
MTHFRP42898 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MTHFRP42898 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MTHFRP42898 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
MTHFRP42898 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MTHFRP42898 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.91■■□□□ 1.1
MTHFRP42898 CDV3P1-201ENST00000471403 739 ntBASIC21.91■■□□□ 1.1
MTHFRP42898 RPPH1-201ENST00000516869 333 ntBASIC21.91■■□□□ 1.1
MTHFRP42898 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.91■■□□□ 1.1
MTHFRP42898 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.91■■□□□ 1.1
MTHFRP42898 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MTHFRP42898 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.91■■□□□ 1.1
MTHFRP42898 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
MTHFRP42898 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
MTHFRP42898 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.9■■□□□ 1.1
MTHFRP42898 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.9■■□□□ 1.1
MTHFRP42898 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.9■■□□□ 1.1
MTHFRP42898 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MTHFRP42898 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
MTHFRP42898 KRT17P3-201ENST00000420566 1262 ntBASIC21.9■■□□□ 1.1
MTHFRP42898 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.9■■□□□ 1.1
MTHFRP42898 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.9■■□□□ 1.1
MTHFRP42898 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.9■■□□□ 1.1
MTHFRP42898 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.9■■□□□ 1.1
MTHFRP42898 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MTHFRP42898 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.9■■□□□ 1.1
MTHFRP42898 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
MTHFRP42898 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MTHFRP42898 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MTHFRP42898 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.9■■□□□ 1.1
MTHFRP42898 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MTHFRP42898 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.9■■□□□ 1.1
MTHFRP42898 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.9■■□□□ 1.1
MTHFRP42898 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.89■■□□□ 1.1
MTHFRP42898 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.89■■□□□ 1.1
MTHFRP42898 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MTHFRP42898 AC137767.1-201ENST00000602918 1920 ntBASIC21.89■■□□□ 1.09
MTHFRP42898 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
MTHFRP42898 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
MTHFRP42898 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MTHFRP42898 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MTHFRP42898 MIR4497-201ENST00000583208 89 ntBASIC21.89■■□□□ 1.09
MTHFRP42898 AL589743.5-201ENST00000616611 1050 ntBASIC21.89■■□□□ 1.09
MTHFRP42898 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
MTHFRP42898 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.89■■□□□ 1.09
MTHFRP42898 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MTHFRP42898 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MTHFRP42898 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.89■■□□□ 1.09
MTHFRP42898 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MTHFRP42898 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MTHFRP42898 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MTHFRP42898 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
MTHFRP42898 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MTHFRP42898 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MTHFRP42898 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MTHFRP42898 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MTHFRP42898 C1QBPP2-201ENST00000528754 825 ntBASIC21.88■■□□□ 1.09
MTHFRP42898 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MTHFRP42898 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.88■■□□□ 1.09
MTHFRP42898 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.88■■□□□ 1.09
MTHFRP42898 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.88■■□□□ 1.09
MTHFRP42898 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MTHFRP42898 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MTHFRP42898 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
MTHFRP42898 AC091799.1-201ENST00000422823 811 ntBASIC21.87■■□□□ 1.09
MTHFRP42898 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
MTHFRP42898 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms