Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEACAM3P40198 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEACAM3P40198 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.04■□□□□ 0.32
CEACAM3P40198 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEACAM3P40198 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CEACAM3P40198 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEACAM3P40198 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.04■□□□□ 0.32
CEACAM3P40198 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEACAM3P40198 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
CEACAM3P40198 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
CEACAM3P40198 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.04■□□□□ 0.32
CEACAM3P40198 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEACAM3P40198 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.03■□□□□ 0.32
CEACAM3P40198 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.03■□□□□ 0.32
CEACAM3P40198 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CEACAM3P40198 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CEACAM3P40198 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CEACAM3P40198 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CEACAM3P40198 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CEACAM3P40198 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CEACAM3P40198 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CEACAM3P40198 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CEACAM3P40198 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CEACAM3P40198 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CEACAM3P40198 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.03■□□□□ 0.32
CEACAM3P40198 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CEACAM3P40198 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.03■□□□□ 0.32
CEACAM3P40198 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CEACAM3P40198 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CEACAM3P40198 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.03■□□□□ 0.32
CEACAM3P40198 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CEACAM3P40198 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CEACAM3P40198 KRT16P2-201ENST00000414673 1423 ntBASIC17.03■□□□□ 0.32
CEACAM3P40198 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
CEACAM3P40198 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CEACAM3P40198 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.02■□□□□ 0.32
CEACAM3P40198 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CEACAM3P40198 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CEACAM3P40198 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.02■□□□□ 0.32
CEACAM3P40198 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CEACAM3P40198 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CEACAM3P40198 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CEACAM3P40198 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CEACAM3P40198 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CEACAM3P40198 AC016769.1-201ENST00000409132 1010 ntBASIC17.02■□□□□ 0.32
CEACAM3P40198 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CEACAM3P40198 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.02■□□□□ 0.32
CEACAM3P40198 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CEACAM3P40198 AC137761.2-201ENST00000561729 223 ntBASIC17.02■□□□□ 0.32
CEACAM3P40198 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.02■□□□□ 0.32
CEACAM3P40198 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.02■□□□□ 0.32
CEACAM3P40198 AC145350.3-201ENST00000569033 163 ntBASIC17.02■□□□□ 0.32
CEACAM3P40198 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.02■□□□□ 0.32
CEACAM3P40198 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CEACAM3P40198 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
CEACAM3P40198 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CEACAM3P40198 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CEACAM3P40198 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CEACAM3P40198 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CEACAM3P40198 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CEACAM3P40198 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CEACAM3P40198 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CEACAM3P40198 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CEACAM3P40198 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CEACAM3P40198 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.01■□□□□ 0.31
CEACAM3P40198 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CEACAM3P40198 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CEACAM3P40198 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.01■□□□□ 0.31
CEACAM3P40198 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.01■□□□□ 0.31
CEACAM3P40198 AL121603.2-201ENST00000557373 2117 ntBASIC17.01■□□□□ 0.31
CEACAM3P40198 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.01■□□□□ 0.31
CEACAM3P40198 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.01■□□□□ 0.31
CEACAM3P40198 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CEACAM3P40198 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CEACAM3P40198 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.01■□□□□ 0.31
CEACAM3P40198 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CEACAM3P40198 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CEACAM3P40198 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CEACAM3P40198 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CEACAM3P40198 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CEACAM3P40198 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17■□□□□ 0.31
CEACAM3P40198 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CEACAM3P40198 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CEACAM3P40198 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17■□□□□ 0.31
CEACAM3P40198 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CEACAM3P40198 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17■□□□□ 0.31
CEACAM3P40198 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17■□□□□ 0.31
CEACAM3P40198 Z98882.1-201ENST00000622160 2253 ntBASIC17■□□□□ 0.31
CEACAM3P40198 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CEACAM3P40198 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17■□□□□ 0.31
CEACAM3P40198 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CEACAM3P40198 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CEACAM3P40198 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CEACAM3P40198 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CEACAM3P40198 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
CEACAM3P40198 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CEACAM3P40198 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CEACAM3P40198 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CEACAM3P40198 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CEACAM3P40198 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms