Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 YJL127C-BYJL127C-B 159 nt3.77□□□□□ -1.81
TDP1P38319 HIT1YJR055W 495 nt3.77□□□□□ -1.81
TDP1P38319 YKL065W-AYKL065W-A 222 nt3.77□□□□□ -1.81
TDP1P38319 YNL089CYNL089C 477 nt3.77□□□□□ -1.81
TDP1P38319 PEP12YOR036W 867 nt3.77□□□□□ -1.81
TDP1P38319 YOR231C-AYOR231C-A 201 nt3.77□□□□□ -1.81
TDP1P38319 TPK2YPL203W 1143 nt3.77□□□□□ -1.81
TDP1P38319 MCM7YBR202W 2538 nt3.77□□□□□ -1.81
TDP1P38319 SIN4YNL236W 2925 nt3.77□□□□□ -1.81
TDP1P38319 ANR2YKL047W 1551 nt3.76□□□□□ -1.81
TDP1P38319 WHI3YNL197C 1986 nt3.76□□□□□ -1.81
TDP1P38319 KIN3YAR018C 1308 nt3.76□□□□□ -1.81
TDP1P38319 HUL5YGL141W 2733 nt3.76□□□□□ -1.81
TDP1P38319 YDL199CYDL199C 2064 nt3.76□□□□□ -1.81
TDP1P38319 PKP2YGL059W 1476 nt3.76□□□□□ -1.81
TDP1P38319 YDR133CYDR133C 336 nt3.76□□□□□ -1.81
TDP1P38319 FYV4YHR059W 393 nt3.76□□□□□ -1.81
TDP1P38319 YKL070WYKL070W 510 nt3.76□□□□□ -1.81
TDP1P38319 YKL136WYKL136W 399 nt3.76□□□□□ -1.81
TDP1P38319 AIM29YKR074W 468 nt3.76□□□□□ -1.81
TDP1P38319 YLL044WYLL044W 447 nt3.76□□□□□ -1.81
TDP1P38319 CTK3YML112W 891 nt3.76□□□□□ -1.81
TDP1P38319 PPN1YDR452W 2025 nt3.76□□□□□ -1.81
TDP1P38319 ASI3YNL008C 2031 nt3.76□□□□□ -1.81
TDP1P38319 MCD4YKL165C 2760 nt3.76□□□□□ -1.81
TDP1P38319 IMH1YLR309C 2736 nt3.76□□□□□ -1.81
TDP1P38319 KIN2YLR096W 3444 nt3.75□□□□□ -1.81
TDP1P38319 SEG1YMR086W 2883 nt3.75□□□□□ -1.81
TDP1P38319 FAD1YDL045C 921 nt3.75□□□□□ -1.81
TDP1P38319 YAP3YHL009C 993 nt3.75□□□□□ -1.81
TDP1P38319 BIG1YHR101C 1008 nt3.75□□□□□ -1.81
TDP1P38319 YHR182C-AYHR182C-A 474 nt3.75□□□□□ -1.81
TDP1P38319 RPL17BYJL177W 555 nt3.75□□□□□ -1.81
TDP1P38319 IDP2YLR174W 1239 nt3.75□□□□□ -1.81
TDP1P38319 FAR8YMR029C 1572 nt3.75□□□□□ -1.81
TDP1P38319 YGL140CYGL140C 3660 nt3.75□□□□□ -1.81
TDP1P38319 RPO21YDL140C 5202 nt3.75□□□□□ -1.81
TDP1P38319 YBP2YGL060W 1926 nt3.74□□□□□ -1.81
TDP1P38319 SEC27YGL137W 2670 nt3.74□□□□□ -1.81
TDP1P38319 TMA17YDL110C 453 nt3.74□□□□□ -1.81
TDP1P38319 TDA2YER071C 381 nt3.74□□□□□ -1.81
TDP1P38319 EMC2YJR088C 879 nt3.74□□□□□ -1.81
TDP1P38319 YJR111CYJR111C 852 nt3.74□□□□□ -1.81
TDP1P38319 YKL050CYKL050C 2769 nt3.74□□□□□ -1.81
TDP1P38319 YMR087WYMR087W 855 nt3.74□□□□□ -1.81
TDP1P38319 YOR225WYOR225W 330 nt3.74□□□□□ -1.81
TDP1P38319 DIB1YPR082C 432 nt3.74□□□□□ -1.81
TDP1P38319 snR54snR54 86 nt3.74□□□□□ -1.81
TDP1P38319 XRS2YDR369C 2565 nt3.74□□□□□ -1.81
TDP1P38319 APL4YPR029C 2499 nt3.73□□□□□ -1.81
TDP1P38319 CSE4YKL049C 690 nt3.73□□□□□ -1.81
TDP1P38319 YAF9YNL107W 681 nt3.73□□□□□ -1.81
TDP1P38319 YOR392WYOR392W 444 nt3.73□□□□□ -1.81
TDP1P38319 YPL225WYPL225W 441 nt3.73□□□□□ -1.81
TDP1P38319 YBR076C-AYBR076C-A 267 nt3.73□□□□□ -1.81
TDP1P38319 VID27YNL212W 2349 nt3.73□□□□□ -1.81
TDP1P38319 YOR022CYOR022C 2148 nt3.73□□□□□ -1.81
TDP1P38319 GAL80YML051W 1308 nt3.72□□□□□ -1.81
TDP1P38319 YML096WYML096W 1578 nt3.72□□□□□ -1.81
TDP1P38319 GPI1YGR216C 1830 nt3.72□□□□□ -1.81
TDP1P38319 ISM1YPL040C 3009 nt3.72□□□□□ -1.81
TDP1P38319 HOM2YDR158W 1098 nt3.72□□□□□ -1.81
TDP1P38319 YDR230WYDR230W 348 nt3.72□□□□□ -1.81
TDP1P38319 GOS1YHL031C 672 nt3.72□□□□□ -1.81
TDP1P38319 RGI2YIL057C 495 nt3.72□□□□□ -1.81
TDP1P38319 YIR020CYIR020C 303 nt3.72□□□□□ -1.81
TDP1P38319 YKL044WYKL044W 321 nt3.72□□□□□ -1.81
TDP1P38319 ARG80YMR042W 534 nt3.72□□□□□ -1.81
TDP1P38319 YNL150WYNL150W 408 nt3.72□□□□□ -1.81
TDP1P38319 DER1YBR201W 636 nt3.72□□□□□ -1.81
TDP1P38319 FYV5YCL058C 459 nt3.72□□□□□ -1.81
TDP1P38319 GDI1YER136W 1356 nt3.72□□□□□ -1.81
TDP1P38319 ADY4YLR227C 1482 nt3.72□□□□□ -1.81
TDP1P38319 NRP1YDL167C 2160 nt3.72□□□□□ -1.81
TDP1P38319 ROD1YOR018W 2514 nt3.72□□□□□ -1.81
TDP1P38319 FAT1YBR041W 2010 nt3.71□□□□□ -1.81
TDP1P38319 GCD10YNL062C 1437 nt3.71□□□□□ -1.82
TDP1P38319 YDL228CYDL228C 642 nt3.71□□□□□ -1.82
TDP1P38319 YGL015CYGL015C 393 nt3.71□□□□□ -1.82
TDP1P38319 HOP2YGL033W 657 nt3.71□□□□□ -1.82
TDP1P38319 RTS3YGR161C 792 nt3.71□□□□□ -1.82
TDP1P38319 YIR014WYIR014W 729 nt3.71□□□□□ -1.82
TDP1P38319 SPC1YJR010C-A 285 nt3.71□□□□□ -1.82
TDP1P38319 YML108WYML108W 318 nt3.71□□□□□ -1.82
TDP1P38319 SPT6YGR116W 4356 nt3.71□□□□□ -1.82
TDP1P38319 SSL1YLR005W 1386 nt3.71□□□□□ -1.82
TDP1P38319 KRI1YNL308C 1776 nt3.71□□□□□ -1.82
TDP1P38319 EXO5YBR163W 1758 nt3.71□□□□□ -1.82
TDP1P38319 YGL074CYGL074C 327 nt3.7□□□□□ -1.82
TDP1P38319 YGR121W-AYGR121W-A 216 nt3.7□□□□□ -1.82
TDP1P38319 RPS4BYHR203C 786 nt3.7□□□□□ -1.82
TDP1P38319 YKL066WYKL066W 444 nt3.7□□□□□ -1.82
TDP1P38319 DAD2YKR083C 402 nt3.7□□□□□ -1.82
TDP1P38319 RRT16YNL105W 429 nt3.7□□□□□ -1.82
TDP1P38319 YPL197CYPL197C 414 nt3.7□□□□□ -1.82
TDP1P38319 HFD1YMR110C 1599 nt3.7□□□□□ -1.82
TDP1P38319 YNR065CYNR065C 3351 nt3.7□□□□□ -1.82
TDP1P38319 OST1YJL002C 1431 nt3.7□□□□□ -1.82
TDP1P38319 YOL075CYOL075C 3885 nt3.7□□□□□ -1.82
TDP1P38319 HNT1YDL125C 477 nt3.69□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 29.9 ms