Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC25.99■■□□□ 1.75
PDE6BP35913 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC25.99■■□□□ 1.75
PDE6BP35913 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC25.99■■□□□ 1.75
PDE6BP35913 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC25.99■■□□□ 1.75
PDE6BP35913 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDE6BP35913 SOX15-203ENST00000570788 1093 ntBASIC25.99■■□□□ 1.75
PDE6BP35913 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC25.99■■□□□ 1.75
PDE6BP35913 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC25.99■■□□□ 1.75
PDE6BP35913 AC069544.1-201ENST00000609399 999 ntBASIC25.99■■□□□ 1.75
PDE6BP35913 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDE6BP35913 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDE6BP35913 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.98■■□□□ 1.75
PDE6BP35913 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PDE6BP35913 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PDE6BP35913 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PDE6BP35913 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PDE6BP35913 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PDE6BP35913 FAM210CP-201ENST00000445714 574 ntBASIC25.98■■□□□ 1.75
PDE6BP35913 SLC29A4P2-201ENST00000504749 1089 ntBASIC25.98■■□□□ 1.75
PDE6BP35913 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
PDE6BP35913 REXO2-208ENST00000539754 791 ntTSL 2 BASIC25.98■■□□□ 1.75
PDE6BP35913 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PDE6BP35913 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
PDE6BP35913 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PDE6BP35913 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PDE6BP35913 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
PDE6BP35913 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
PDE6BP35913 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PDE6BP35913 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PDE6BP35913 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
PDE6BP35913 SAPCD2P1-201ENST00000395413 1184 ntBASIC25.97■■□□□ 1.75
PDE6BP35913 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PDE6BP35913 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC25.97■■□□□ 1.75
PDE6BP35913 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
PDE6BP35913 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC25.97■■□□□ 1.75
PDE6BP35913 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.96■■□□□ 1.75
PDE6BP35913 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC25.96■■□□□ 1.75
PDE6BP35913 NXN-202ENST00000537628 1340 ntTSL 3 BASIC25.96■■□□□ 1.75
PDE6BP35913 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.96■■□□□ 1.75
PDE6BP35913 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC25.96■■□□□ 1.75
PDE6BP35913 HES2-205ENST00000487437 968 ntTSL 3 BASIC25.96■■□□□ 1.75
PDE6BP35913 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC25.96■■□□□ 1.75
PDE6BP35913 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC25.96■■□□□ 1.75
PDE6BP35913 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC25.96■■□□□ 1.75
PDE6BP35913 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
PDE6BP35913 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PDE6BP35913 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
PDE6BP35913 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
PDE6BP35913 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC25.95■■□□□ 1.75
PDE6BP35913 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
PDE6BP35913 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC25.95■■□□□ 1.75
PDE6BP35913 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.95■■□□□ 1.75
PDE6BP35913 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
PDE6BP35913 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PDE6BP35913 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PDE6BP35913 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PDE6BP35913 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PDE6BP35913 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PDE6BP35913 MIR1224-201ENST00000408193 85 ntBASIC25.95■■□□□ 1.74
PDE6BP35913 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
PDE6BP35913 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PDE6BP35913 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.74
PDE6BP35913 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
PDE6BP35913 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
PDE6BP35913 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
PDE6BP35913 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PDE6BP35913 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.74
PDE6BP35913 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.94■■□□□ 1.74
PDE6BP35913 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PDE6BP35913 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC25.94■■□□□ 1.74
PDE6BP35913 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
PDE6BP35913 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC25.94■■□□□ 1.74
PDE6BP35913 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PDE6BP35913 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
PDE6BP35913 CRK-204ENST00000574295 1391 ntTSL 5 BASIC25.94■■□□□ 1.74
PDE6BP35913 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PDE6BP35913 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
PDE6BP35913 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
PDE6BP35913 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC25.93■■□□□ 1.74
PDE6BP35913 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PDE6BP35913 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PDE6BP35913 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PDE6BP35913 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PDE6BP35913 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC25.93■■□□□ 1.74
PDE6BP35913 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC25.93■■□□□ 1.74
PDE6BP35913 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC25.93■■□□□ 1.74
PDE6BP35913 LINC01023-201ENST00000606054 436 ntBASIC25.93■■□□□ 1.74
PDE6BP35913 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.93■■□□□ 1.74
PDE6BP35913 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.93■■□□□ 1.74
PDE6BP35913 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
PDE6BP35913 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PDE6BP35913 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
PDE6BP35913 POM121L13P-201ENST00000422362 380 ntBASIC25.92■■□□□ 1.74
PDE6BP35913 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
PDE6BP35913 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC25.92■■□□□ 1.74
PDE6BP35913 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PDE6BP35913 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PDE6BP35913 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.91■■□□□ 1.74
PDE6BP35913 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.91■■□□□ 1.74
PDE6BP35913 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms