Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ERCC2P18074 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ERCC2P18074 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ERCC2P18074 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.53■■□□□ 1.04
ERCC2P18074 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.53■■□□□ 1.04
ERCC2P18074 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
ERCC2P18074 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.53■■□□□ 1.04
ERCC2P18074 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.53■■□□□ 1.04
ERCC2P18074 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ERCC2P18074 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.53■■□□□ 1.04
ERCC2P18074 KRT18P20-201ENST00000548986 1279 ntBASIC21.53■■□□□ 1.04
ERCC2P18074 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.53■■□□□ 1.04
ERCC2P18074 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ERCC2P18074 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.53■■□□□ 1.04
ERCC2P18074 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ERCC2P18074 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ERCC2P18074 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.52■■□□□ 1.04
ERCC2P18074 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ERCC2P18074 AL162430.1-201ENST00000480705 870 ntBASIC21.52■■□□□ 1.04
ERCC2P18074 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.52■■□□□ 1.04
ERCC2P18074 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ERCC2P18074 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.52■■□□□ 1.04
ERCC2P18074 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.52■■□□□ 1.04
ERCC2P18074 AC120498.10-201ENST00000621827 505 ntBASIC21.52■■□□□ 1.04
ERCC2P18074 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.52■■□□□ 1.04
ERCC2P18074 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
ERCC2P18074 KRT16P2-201ENST00000414673 1423 ntBASIC21.52■■□□□ 1.04
ERCC2P18074 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
ERCC2P18074 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
ERCC2P18074 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ERCC2P18074 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
ERCC2P18074 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ERCC2P18074 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ERCC2P18074 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ERCC2P18074 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ERCC2P18074 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
ERCC2P18074 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.51■■□□□ 1.03
ERCC2P18074 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ERCC2P18074 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ERCC2P18074 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
ERCC2P18074 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.51■■□□□ 1.03
ERCC2P18074 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ERCC2P18074 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ERCC2P18074 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
ERCC2P18074 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.51■■□□□ 1.03
ERCC2P18074 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.51■■□□□ 1.03
ERCC2P18074 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ERCC2P18074 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ERCC2P18074 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
ERCC2P18074 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC2P18074 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC2P18074 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.5■■□□□ 1.03
ERCC2P18074 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC2P18074 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
ERCC2P18074 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC2P18074 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC2P18074 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC2P18074 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC2P18074 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
ERCC2P18074 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
ERCC2P18074 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC2P18074 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
ERCC2P18074 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC2P18074 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
ERCC2P18074 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC2P18074 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC2P18074 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC2P18074 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.49■■□□□ 1.03
ERCC2P18074 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ERCC2P18074 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
ERCC2P18074 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.49■■□□□ 1.03
ERCC2P18074 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.49■■□□□ 1.03
ERCC2P18074 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.49■■□□□ 1.03
ERCC2P18074 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ERCC2P18074 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ERCC2P18074 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.49■■□□□ 1.03
ERCC2P18074 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ERCC2P18074 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ERCC2P18074 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.48■■□□□ 1.03
ERCC2P18074 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ERCC2P18074 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.48■■□□□ 1.03
ERCC2P18074 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.48■■□□□ 1.03
ERCC2P18074 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ERCC2P18074 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.48■■□□□ 1.03
ERCC2P18074 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.48■■□□□ 1.03
ERCC2P18074 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.48■■□□□ 1.03
ERCC2P18074 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ERCC2P18074 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.48■■□□□ 1.03
ERCC2P18074 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ERCC2P18074 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.48■■□□□ 1.03
ERCC2P18074 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ERCC2P18074 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ERCC2P18074 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ERCC2P18074 PKD1P6-201ENST00000343738 4769 ntBASIC21.47■■□□□ 1.03
ERCC2P18074 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ERCC2P18074 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.47■■□□□ 1.03
ERCC2P18074 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.47■■□□□ 1.03
ERCC2P18074 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.47■■□□□ 1.03
ERCC2P18074 UBE2DNL-204ENST00000602536 740 ntBASIC21.47■■□□□ 1.03
ERCC2P18074 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms