Protein–RNA interactions for Protein: P0C7I0

USP17L8, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 8, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L8P0C7I0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.64
USP17L8P0C7I0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.33■■□□□ 1.64
USP17L8P0C7I0 AC092053.2-201ENST00000640557 1818 ntBASIC25.33■■□□□ 1.64
USP17L8P0C7I0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
USP17L8P0C7I0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
USP17L8P0C7I0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
USP17L8P0C7I0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
USP17L8P0C7I0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
USP17L8P0C7I0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
USP17L8P0C7I0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC25.32■■□□□ 1.64
USP17L8P0C7I0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC25.32■■□□□ 1.64
USP17L8P0C7I0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC25.32■■□□□ 1.64
USP17L8P0C7I0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC25.32■■□□□ 1.64
USP17L8P0C7I0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
USP17L8P0C7I0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
USP17L8P0C7I0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
USP17L8P0C7I0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
USP17L8P0C7I0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.32■■□□□ 1.64
USP17L8P0C7I0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
USP17L8P0C7I0 AC026471.6-201ENST00000622954 1905 ntBASIC25.31■■□□□ 1.64
USP17L8P0C7I0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
USP17L8P0C7I0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
USP17L8P0C7I0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
USP17L8P0C7I0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
USP17L8P0C7I0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
USP17L8P0C7I0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
USP17L8P0C7I0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC25.31■■□□□ 1.64
USP17L8P0C7I0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
USP17L8P0C7I0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
USP17L8P0C7I0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC25.31■■□□□ 1.64
USP17L8P0C7I0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
USP17L8P0C7I0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC25.31■■□□□ 1.64
USP17L8P0C7I0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
USP17L8P0C7I0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
USP17L8P0C7I0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
USP17L8P0C7I0 KRT17P1-201ENST00000399211 1546 ntBASIC25.31■■□□□ 1.64
USP17L8P0C7I0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
USP17L8P0C7I0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
USP17L8P0C7I0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
USP17L8P0C7I0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
USP17L8P0C7I0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
USP17L8P0C7I0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
USP17L8P0C7I0 AL355472.2-201ENST00000422958 438 ntBASIC25.3■■□□□ 1.64
USP17L8P0C7I0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC25.3■■□□□ 1.64
USP17L8P0C7I0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
USP17L8P0C7I0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.3■■□□□ 1.64
USP17L8P0C7I0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
USP17L8P0C7I0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.3■■□□□ 1.64
USP17L8P0C7I0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.3■■□□□ 1.64
USP17L8P0C7I0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
USP17L8P0C7I0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.3■■□□□ 1.64
USP17L8P0C7I0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.29■■□□□ 1.64
USP17L8P0C7I0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
USP17L8P0C7I0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
USP17L8P0C7I0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC25.29■■□□□ 1.64
USP17L8P0C7I0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC25.29■■□□□ 1.64
USP17L8P0C7I0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC25.29■■□□□ 1.64
USP17L8P0C7I0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC25.29■■□□□ 1.64
USP17L8P0C7I0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
USP17L8P0C7I0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
USP17L8P0C7I0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
USP17L8P0C7I0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
USP17L8P0C7I0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
USP17L8P0C7I0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
USP17L8P0C7I0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC25.28■■□□□ 1.64
USP17L8P0C7I0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.28■■□□□ 1.64
USP17L8P0C7I0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
USP17L8P0C7I0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
USP17L8P0C7I0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
USP17L8P0C7I0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
USP17L8P0C7I0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
USP17L8P0C7I0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC25.28■■□□□ 1.64
USP17L8P0C7I0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC25.28■■□□□ 1.64
USP17L8P0C7I0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
USP17L8P0C7I0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
USP17L8P0C7I0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC25.28■■□□□ 1.64
USP17L8P0C7I0 USP36-216ENST00000589424 970 ntTSL 5 BASIC25.28■■□□□ 1.64
USP17L8P0C7I0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
USP17L8P0C7I0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.28■■□□□ 1.64
USP17L8P0C7I0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
USP17L8P0C7I0 AC003102.1-202ENST00000563394 1796 ntBASIC25.28■■□□□ 1.64
USP17L8P0C7I0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
USP17L8P0C7I0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.28■■□□□ 1.64
USP17L8P0C7I0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.28■■□□□ 1.64
USP17L8P0C7I0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
USP17L8P0C7I0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
USP17L8P0C7I0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.27■■□□□ 1.64
USP17L8P0C7I0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.27■■□□□ 1.64
USP17L8P0C7I0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
USP17L8P0C7I0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
USP17L8P0C7I0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
USP17L8P0C7I0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC25.27■■□□□ 1.64
USP17L8P0C7I0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
USP17L8P0C7I0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
USP17L8P0C7I0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
USP17L8P0C7I0 NME6-213ENST00000451657 871 ntTSL 2 BASIC25.27■■□□□ 1.64
USP17L8P0C7I0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC25.27■■□□□ 1.64
USP17L8P0C7I0 FAM21FP-204ENST00000608637 956 ntBASIC25.27■■□□□ 1.64
USP17L8P0C7I0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.27■■□□□ 1.64
USP17L8P0C7I0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms