Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 RARRES2P11-201ENST00000635158 484 ntBASIC25.09■■□□□ 1.61
APPP05067 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC25.09■■□□□ 1.61
APPP05067 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
APPP05067 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
APPP05067 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
APPP05067 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
APPP05067 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
APPP05067 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC25.08■■□□□ 1.61
APPP05067 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC25.08■■□□□ 1.61
APPP05067 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
APPP05067 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
APPP05067 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.08■■□□□ 1.61
APPP05067 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
APPP05067 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
APPP05067 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
APPP05067 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
APPP05067 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC25.08■■□□□ 1.6
APPP05067 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
APPP05067 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
APPP05067 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
APPP05067 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
APPP05067 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
APPP05067 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC25.07■■□□□ 1.6
APPP05067 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
APPP05067 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
APPP05067 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
APPP05067 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
APPP05067 KRT16P2-201ENST00000414673 1423 ntBASIC25.07■■□□□ 1.6
APPP05067 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
APPP05067 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
APPP05067 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
APPP05067 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
APPP05067 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
APPP05067 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.07■■□□□ 1.6
APPP05067 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.07■■□□□ 1.6
APPP05067 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC25.07■■□□□ 1.6
APPP05067 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC25.07■■□□□ 1.6
APPP05067 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
APPP05067 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.07■■□□□ 1.6
APPP05067 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
APPP05067 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
APPP05067 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
APPP05067 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC25.07■■□□□ 1.6
APPP05067 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC25.07■■□□□ 1.6
APPP05067 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
APPP05067 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC25.06■■□□□ 1.6
APPP05067 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
APPP05067 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
APPP05067 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
APPP05067 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
APPP05067 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
APPP05067 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC25.06■■□□□ 1.6
APPP05067 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC25.06■■□□□ 1.6
APPP05067 SLC7A5P1-201ENST00000568957 537 ntBASIC25.06■■□□□ 1.6
APPP05067 AC073111.5-205ENST00000641717 521 ntBASIC25.06■■□□□ 1.6
APPP05067 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
APPP05067 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC25.06■■□□□ 1.6
APPP05067 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC25.06■■□□□ 1.6
APPP05067 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
APPP05067 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
APPP05067 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
APPP05067 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
APPP05067 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
APPP05067 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
APPP05067 BMP1-204ENST00000397814 836 ntTSL 4 BASIC25.05■■□□□ 1.6
APPP05067 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC25.05■■□□□ 1.6
APPP05067 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
APPP05067 AC010536.3-201ENST00000620306 533 ntBASIC25.05■■□□□ 1.6
APPP05067 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC25.05■■□□□ 1.6
APPP05067 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
APPP05067 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
APPP05067 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
APPP05067 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
APPP05067 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
APPP05067 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
APPP05067 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.04■■□□□ 1.6
APPP05067 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
APPP05067 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
APPP05067 CDCA4P2-201ENST00000441182 718 ntBASIC25.04■■□□□ 1.6
APPP05067 AC090192.1-201ENST00000517740 490 ntBASIC25.04■■□□□ 1.6
APPP05067 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.04■■□□□ 1.6
APPP05067 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC25.04■■□□□ 1.6
APPP05067 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC25.04■■□□□ 1.6
APPP05067 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
APPP05067 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC25.04■■□□□ 1.6
APPP05067 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
APPP05067 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
APPP05067 DYM-203ENST00000442713 2147 ntTSL 2 BASIC25.03■■□□□ 1.6
APPP05067 WWC2-AS2-201ENST00000578387 2183 ntBASIC25.03■■□□□ 1.6
APPP05067 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
APPP05067 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
APPP05067 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
APPP05067 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
APPP05067 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.03■■□□□ 1.6
APPP05067 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC25.03■■□□□ 1.6
APPP05067 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC25.03■■□□□ 1.6
APPP05067 DUX4L16-201ENST00000555130 1264 ntBASIC25.03■■□□□ 1.6
APPP05067 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
APPP05067 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
APPP05067 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms