Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.48■□□□□ 0.71
PRKNO60260 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.48■□□□□ 0.71
PRKNO60260 AC244015.2-201ENST00000616358 1861 ntBASIC19.48■□□□□ 0.71
PRKNO60260 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.48■□□□□ 0.71
PRKNO60260 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKNO60260 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKNO60260 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.48■□□□□ 0.71
PRKNO60260 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKNO60260 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.48■□□□□ 0.71
PRKNO60260 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKNO60260 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKNO60260 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKNO60260 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRKNO60260 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRKNO60260 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKNO60260 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRKNO60260 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRKNO60260 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.47■□□□□ 0.71
PRKNO60260 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRKNO60260 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRKNO60260 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRKNO60260 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRKNO60260 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRKNO60260 POU5F1P4-201ENST00000413175 1085 ntBASIC19.47■□□□□ 0.71
PRKNO60260 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.47■□□□□ 0.71
PRKNO60260 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRKNO60260 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRKNO60260 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRKNO60260 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRKNO60260 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKNO60260 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKNO60260 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKNO60260 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKNO60260 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKNO60260 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.46■□□□□ 0.71
PRKNO60260 AC010536.3-201ENST00000620306 533 ntBASIC19.46■□□□□ 0.71
PRKNO60260 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.46■□□□□ 0.71
PRKNO60260 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PRKNO60260 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKNO60260 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.46■□□□□ 0.71
PRKNO60260 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.46■□□□□ 0.71
PRKNO60260 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PRKNO60260 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PRKNO60260 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKNO60260 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKNO60260 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKNO60260 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PRKNO60260 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKNO60260 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKNO60260 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKNO60260 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.45■□□□□ 0.7
PRKNO60260 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.45■□□□□ 0.7
PRKNO60260 CROCCP5-201ENST00000436658 830 ntBASIC19.45■□□□□ 0.7
PRKNO60260 AC026185.1-201ENST00000445748 174 ntBASIC19.45■□□□□ 0.7
PRKNO60260 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKNO60260 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.45■□□□□ 0.7
PRKNO60260 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.45■□□□□ 0.7
PRKNO60260 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.45■□□□□ 0.7
PRKNO60260 SLC7A5P1-201ENST00000568957 537 ntBASIC19.45■□□□□ 0.7
PRKNO60260 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
PRKNO60260 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.45■□□□□ 0.7
PRKNO60260 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKNO60260 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRKNO60260 AC026310.3-201ENST00000625186 2373 ntBASIC19.45■□□□□ 0.7
PRKNO60260 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRKNO60260 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKNO60260 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKNO60260 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PRKNO60260 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRKNO60260 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKNO60260 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.44■□□□□ 0.7
PRKNO60260 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.44■□□□□ 0.7
PRKNO60260 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PRKNO60260 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.44■□□□□ 0.7
PRKNO60260 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PRKNO60260 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
PRKNO60260 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
PRKNO60260 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRKNO60260 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
PRKNO60260 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.44■□□□□ 0.7
PRKNO60260 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PRKNO60260 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRKNO60260 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRKNO60260 AL137060.1-201ENST00000618151 2648 ntBASIC19.44■□□□□ 0.7
PRKNO60260 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRKNO60260 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRKNO60260 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.44■□□□□ 0.7
PRKNO60260 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRKNO60260 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
PRKNO60260 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PRKNO60260 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRKNO60260 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.43■□□□□ 0.7
PRKNO60260 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PRKNO60260 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRKNO60260 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.43■□□□□ 0.7
PRKNO60260 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRKNO60260 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRKNO60260 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PRKNO60260 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.43■□□□□ 0.7
PRKNO60260 CNN2P6-201ENST00000439038 900 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms