Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TO15178 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.29■□□□□ 0.68
TO15178 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.29■□□□□ 0.68
TO15178 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.29■□□□□ 0.68
TO15178 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TO15178 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TO15178 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TO15178 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TO15178 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TO15178 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TO15178 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
TO15178 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TO15178 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.28■□□□□ 0.68
TO15178 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TO15178 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.28■□□□□ 0.68
TO15178 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.28■□□□□ 0.68
TO15178 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TO15178 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TO15178 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TO15178 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.28■□□□□ 0.68
TO15178 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TO15178 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TO15178 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TO15178 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TO15178 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.27■□□□□ 0.68
TO15178 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TO15178 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.27■□□□□ 0.68
TO15178 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.27■□□□□ 0.68
TO15178 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TO15178 AC243732.1-201ENST00000612648 864 ntBASIC19.27■□□□□ 0.68
TO15178 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.27■□□□□ 0.68
TO15178 AC092437.1-201ENST00000624794 1048 ntBASIC19.27■□□□□ 0.68
TO15178 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TO15178 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TO15178 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TO15178 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TO15178 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.27■□□□□ 0.68
TO15178 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TO15178 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TO15178 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.27■□□□□ 0.67
TO15178 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
TO15178 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TO15178 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.26■□□□□ 0.67
TO15178 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TO15178 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TO15178 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TO15178 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TO15178 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
TO15178 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TO15178 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TO15178 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TO15178 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.25■□□□□ 0.67
TO15178 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.25■□□□□ 0.67
TO15178 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TO15178 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TO15178 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TO15178 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TO15178 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TO15178 AC026310.3-201ENST00000625186 2373 ntBASIC19.25■□□□□ 0.67
TO15178 FEM1AP4-201ENST00000443167 1987 ntBASIC19.25■□□□□ 0.67
TO15178 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TO15178 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TO15178 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TO15178 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TO15178 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TO15178 AC245052.3-201ENST00000450182 901 ntBASIC19.25■□□□□ 0.67
TO15178 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
TO15178 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.25■□□□□ 0.67
TO15178 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.25■□□□□ 0.67
TO15178 RARRES2P11-201ENST00000635158 484 ntBASIC19.25■□□□□ 0.67
TO15178 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TO15178 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TO15178 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TO15178 RBM17P2-201ENST00000616397 1405 ntBASIC19.25■□□□□ 0.67
TO15178 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TO15178 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TO15178 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.24■□□□□ 0.67
TO15178 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TO15178 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TO15178 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TO15178 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.24■□□□□ 0.67
TO15178 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.24■□□□□ 0.67
TO15178 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.24■□□□□ 0.67
TO15178 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.24■□□□□ 0.67
TO15178 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.24■□□□□ 0.67
TO15178 MFSD11-216ENST00000590393 1141 ntBASIC19.24■□□□□ 0.67
TO15178 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.24■□□□□ 0.67
TO15178 IKBKGP1-201ENST00000612193 1073 ntBASIC19.24■□□□□ 0.67
TO15178 AC010536.3-201ENST00000620306 533 ntBASIC19.24■□□□□ 0.67
TO15178 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TO15178 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TO15178 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.24■□□□□ 0.67
TO15178 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TO15178 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TO15178 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TO15178 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.24■□□□□ 0.67
TO15178 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TO15178 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TO15178 BID-214ENST00000617586 542 ntTSL 5 BASIC19.23■□□□□ 0.67
TO15178 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms