Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN4O14493 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN4O14493 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN4O14493 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CLDN4O14493 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN4O14493 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN4O14493 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.71■□□□□ 0.75
CLDN4O14493 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.71■□□□□ 0.75
CLDN4O14493 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDN4O14493 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN4O14493 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CLDN4O14493 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN4O14493 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN4O14493 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLDN4O14493 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN4O14493 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN4O14493 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLDN4O14493 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN4O14493 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN4O14493 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.7■□□□□ 0.74
CLDN4O14493 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.7■□□□□ 0.74
CLDN4O14493 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CLDN4O14493 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.7■□□□□ 0.74
CLDN4O14493 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN4O14493 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.7■□□□□ 0.74
CLDN4O14493 BID-214ENST00000617586 542 ntTSL 5 BASIC19.7■□□□□ 0.74
CLDN4O14493 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CLDN4O14493 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN4O14493 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN4O14493 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN4O14493 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CLDN4O14493 Z98882.1-201ENST00000622160 2253 ntBASIC19.69■□□□□ 0.74
CLDN4O14493 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN4O14493 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CLDN4O14493 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN4O14493 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.69■□□□□ 0.74
CLDN4O14493 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN4O14493 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN4O14493 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.69■□□□□ 0.74
CLDN4O14493 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.69■□□□□ 0.74
CLDN4O14493 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.69■□□□□ 0.74
CLDN4O14493 IKBKGP1-201ENST00000612193 1073 ntBASIC19.69■□□□□ 0.74
CLDN4O14493 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.69■□□□□ 0.74
CLDN4O14493 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.69■□□□□ 0.74
CLDN4O14493 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN4O14493 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN4O14493 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN4O14493 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN4O14493 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN4O14493 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN4O14493 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
CLDN4O14493 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.68■□□□□ 0.74
CLDN4O14493 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN4O14493 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN4O14493 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CLDN4O14493 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN4O14493 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN4O14493 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN4O14493 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN4O14493 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN4O14493 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN4O14493 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN4O14493 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN4O14493 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN4O14493 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN4O14493 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN4O14493 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN4O14493 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN4O14493 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN4O14493 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN4O14493 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN4O14493 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN4O14493 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN4O14493 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CLDN4O14493 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN4O14493 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN4O14493 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.67■□□□□ 0.74
CLDN4O14493 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN4O14493 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN4O14493 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN4O14493 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CLDN4O14493 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.67■□□□□ 0.74
CLDN4O14493 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.67■□□□□ 0.74
CLDN4O14493 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CLDN4O14493 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CLDN4O14493 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CLDN4O14493 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN4O14493 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.66■□□□□ 0.74
CLDN4O14493 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN4O14493 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN4O14493 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.66■□□□□ 0.74
CLDN4O14493 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN4O14493 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN4O14493 AC004911.1-201ENST00000416316 871 ntBASIC19.66■□□□□ 0.74
CLDN4O14493 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN4O14493 AC245052.3-201ENST00000450182 901 ntBASIC19.66■□□□□ 0.74
CLDN4O14493 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.66■□□□□ 0.74
CLDN4O14493 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN4O14493 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.66■□□□□ 0.74
CLDN4O14493 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms