Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CHL1O00533 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CHL1O00533 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CHL1O00533 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CHL1O00533 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CHL1O00533 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC27.05■■□□□ 1.92
CHL1O00533 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
CHL1O00533 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CHL1O00533 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
CHL1O00533 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC27.05■■□□□ 1.92
CHL1O00533 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC27.05■■□□□ 1.92
CHL1O00533 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CHL1O00533 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
CHL1O00533 TSPY6P-201ENST00000448518 926 ntBASIC27.05■■□□□ 1.92
CHL1O00533 AC245052.3-201ENST00000450182 901 ntBASIC27.05■■□□□ 1.92
CHL1O00533 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CHL1O00533 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
CHL1O00533 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
CHL1O00533 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CHL1O00533 DYM-203ENST00000442713 2147 ntTSL 2 BASIC27.05■■□□□ 1.92
CHL1O00533 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CHL1O00533 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CHL1O00533 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CHL1O00533 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
CHL1O00533 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CHL1O00533 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CHL1O00533 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC27.04■■□□□ 1.92
CHL1O00533 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC27.04■■□□□ 1.92
CHL1O00533 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CHL1O00533 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
CHL1O00533 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
CHL1O00533 AC016405.3-201ENST00000607710 860 ntBASIC27.04■■□□□ 1.92
CHL1O00533 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC27.04■■□□□ 1.92
CHL1O00533 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
CHL1O00533 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CHL1O00533 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC27.04■■□□□ 1.92
CHL1O00533 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CHL1O00533 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CHL1O00533 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC27.04■■□□□ 1.92
CHL1O00533 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC27.03■■□□□ 1.92
CHL1O00533 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
CHL1O00533 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC27.03■■□□□ 1.92
CHL1O00533 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC27.03■■□□□ 1.92
CHL1O00533 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC27.03■■□□□ 1.92
CHL1O00533 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC27.03■■□□□ 1.92
CHL1O00533 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC27.03■■□□□ 1.92
CHL1O00533 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CHL1O00533 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
CHL1O00533 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC27.03■■□□□ 1.92
CHL1O00533 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC27.03■■□□□ 1.92
CHL1O00533 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CHL1O00533 MARS-234ENST00000630571 216 ntTSL 5 BASIC27.03■■□□□ 1.92
CHL1O00533 MARS-235ENST00000630803 183 ntTSL 3 BASIC27.03■■□□□ 1.92
CHL1O00533 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC27.02■■□□□ 1.92
CHL1O00533 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CHL1O00533 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CHL1O00533 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
CHL1O00533 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CHL1O00533 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
CHL1O00533 AF201337.1-201ENST00000520239 748 ntBASIC27.02■■□□□ 1.92
CHL1O00533 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CHL1O00533 EMC9-206ENST00000560403 872 ntTSL 2 BASIC27.02■■□□□ 1.92
CHL1O00533 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC27.02■■□□□ 1.92
CHL1O00533 OR10C1-204ENST00000622521 1039 ntBASIC27.02■■□□□ 1.92
CHL1O00533 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CHL1O00533 BID-212ENST00000614949 1988 ntTSL 5 BASIC27.02■■□□□ 1.92
CHL1O00533 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CHL1O00533 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC27.01■■□□□ 1.91
CHL1O00533 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHL1O00533 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHL1O00533 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC27.01■■□□□ 1.91
CHL1O00533 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC27.01■■□□□ 1.91
CHL1O00533 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHL1O00533 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC27.01■■□□□ 1.91
CHL1O00533 Z98882.1-201ENST00000622160 2253 ntBASIC27.01■■□□□ 1.91
CHL1O00533 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHL1O00533 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHL1O00533 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC27■■□□□ 1.91
CHL1O00533 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHL1O00533 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHL1O00533 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
CHL1O00533 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHL1O00533 BET1L-204ENST00000410108 637 ntTSL 3 BASIC27■■□□□ 1.91
CHL1O00533 AL512625.2-201ENST00000417533 625 ntBASIC27■■□□□ 1.91
CHL1O00533 AC105036.2-201ENST00000569468 176 ntBASIC27■■□□□ 1.91
CHL1O00533 AC142086.2-201ENST00000569753 217 ntBASIC27■■□□□ 1.91
CHL1O00533 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
CHL1O00533 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC27■■□□□ 1.91
CHL1O00533 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC27■■□□□ 1.91
CHL1O00533 AC079834.2-201ENST00000609776 1949 ntBASIC27■■□□□ 1.91
CHL1O00533 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
CHL1O00533 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHL1O00533 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CHL1O00533 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC26.99■■□□□ 1.91
CHL1O00533 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
CHL1O00533 AC093787.1-201ENST00000450396 207 ntBASIC26.99■■□□□ 1.91
CHL1O00533 RARRES2P4-201ENST00000514074 484 ntBASIC26.99■■□□□ 1.91
CHL1O00533 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26.99■■□□□ 1.91
CHL1O00533 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
CHL1O00533 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms