Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H3BM21 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
H3BM21 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
H3BM21 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
H3BM21 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.82■□□□□ 0.92
H3BM21 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
H3BM21 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.81■□□□□ 0.92
H3BM21 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.81■□□□□ 0.92
H3BM21 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
H3BM21 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
H3BM21 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
H3BM21 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
H3BM21 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
H3BM21 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
H3BM21 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
H3BM21 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
H3BM21 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
H3BM21 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
H3BM21 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
H3BM21 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
H3BM21 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.81■□□□□ 0.92
H3BM21 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
H3BM21 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.81■□□□□ 0.92
H3BM21 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
H3BM21 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
H3BM21 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
H3BM21 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.8■□□□□ 0.92
H3BM21 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H3BM21 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
H3BM21 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H3BM21 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
H3BM21 FBXW4P1-201ENST00000426721 2239 ntBASIC20.8■□□□□ 0.92
H3BM21 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.8■□□□□ 0.92
H3BM21 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.8■□□□□ 0.92
H3BM21 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
H3BM21 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.8■□□□□ 0.92
H3BM21 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.8■□□□□ 0.92
H3BM21 GUSBP6-202ENST00000438529 1198 ntBASIC20.8■□□□□ 0.92
H3BM21 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.8■□□□□ 0.92
H3BM21 AC007322.4-201ENST00000509611 723 ntBASIC20.8■□□□□ 0.92
H3BM21 CD99P1-205ENST00000527459 561 ntBASIC20.8■□□□□ 0.92
H3BM21 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
H3BM21 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H3BM21 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H3BM21 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H3BM21 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.79■□□□□ 0.92
H3BM21 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
H3BM21 PKD1P6-201ENST00000343738 4769 ntBASIC20.79■□□□□ 0.92
H3BM21 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
H3BM21 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
H3BM21 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
H3BM21 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.79■□□□□ 0.92
H3BM21 LINC00565-201ENST00000562710 2331 ntBASIC20.79■□□□□ 0.92
H3BM21 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
H3BM21 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
H3BM21 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
H3BM21 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
H3BM21 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
H3BM21 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H3BM21 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
H3BM21 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
H3BM21 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H3BM21 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
H3BM21 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
H3BM21 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
H3BM21 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.78■□□□□ 0.92
H3BM21 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.78■□□□□ 0.92
H3BM21 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.78■□□□□ 0.92
H3BM21 AC008694.1-202ENST00000636953 945 ntBASIC20.78■□□□□ 0.92
H3BM21 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H3BM21 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
H3BM21 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
H3BM21 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
H3BM21 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
H3BM21 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H3BM21 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H3BM21 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
H3BM21 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.78■□□□□ 0.92
H3BM21 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
H3BM21 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
H3BM21 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H3BM21 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.77■□□□□ 0.92
H3BM21 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.77■□□□□ 0.92
H3BM21 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
H3BM21 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
H3BM21 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H3BM21 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.77■□□□□ 0.92
H3BM21 CYP2T1P-201ENST00000432607 1285 ntBASIC20.77■□□□□ 0.92
H3BM21 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.77■□□□□ 0.92
H3BM21 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
H3BM21 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
H3BM21 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.77■□□□□ 0.92
H3BM21 AC133041.1-202ENST00000642053 222 ntBASIC20.77■□□□□ 0.92
H3BM21 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
H3BM21 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.77■□□□□ 0.91
H3BM21 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.77■□□□□ 0.91
H3BM21 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
H3BM21 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
H3BM21 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.76■□□□□ 0.91
H3BM21 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms