Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC162PA2VCL2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.89■□□□□ 0.93
CCDC162PA2VCL2 DUX4L6-201ENST00000626483 1275 ntBASIC20.89■□□□□ 0.93
CCDC162PA2VCL2 DUX4L1-201ENST00000627662 1275 ntBASIC20.89■□□□□ 0.93
CCDC162PA2VCL2 DUX4L8-201ENST00000629013 1275 ntBASIC20.89■□□□□ 0.93
CCDC162PA2VCL2 DUX4L3-201ENST00000630187 1275 ntBASIC20.89■□□□□ 0.93
CCDC162PA2VCL2 DUX4L7-201ENST00000630678 1275 ntBASIC20.89■□□□□ 0.93
CCDC162PA2VCL2 DUX4L5-201ENST00000630834 1275 ntBASIC20.89■□□□□ 0.93
CCDC162PA2VCL2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCDC162PA2VCL2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC162PA2VCL2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CCDC162PA2VCL2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC162PA2VCL2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
CCDC162PA2VCL2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC162PA2VCL2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC162PA2VCL2 AP004607.4-201ENST00000530158 1459 ntBASIC20.88■□□□□ 0.93
CCDC162PA2VCL2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC162PA2VCL2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC162PA2VCL2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC162PA2VCL2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CCDC162PA2VCL2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC162PA2VCL2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC162PA2VCL2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC162PA2VCL2 AC010141.2-201ENST00000452426 721 ntBASIC20.88■□□□□ 0.93
CCDC162PA2VCL2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.88■□□□□ 0.93
CCDC162PA2VCL2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC162PA2VCL2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC162PA2VCL2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC162PA2VCL2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC162PA2VCL2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCDC162PA2VCL2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC162PA2VCL2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC162PA2VCL2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC162PA2VCL2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC162PA2VCL2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC162PA2VCL2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 AC097381.1-201ENST00000429019 1296 ntBASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 KRT18P61-201ENST00000585825 1298 ntBASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 AC008175.2-201ENST00000612840 297 ntBASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC162PA2VCL2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC162PA2VCL2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CCDC162PA2VCL2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC162PA2VCL2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC162PA2VCL2 AC019069.1-201ENST00000610008 1333 ntBASIC20.86■□□□□ 0.93
CCDC162PA2VCL2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC162PA2VCL2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC162PA2VCL2 POU5F1P4-201ENST00000413175 1085 ntBASIC20.86■□□□□ 0.93
CCDC162PA2VCL2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.86■□□□□ 0.93
CCDC162PA2VCL2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC162PA2VCL2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC162PA2VCL2 AP001160.3-201ENST00000601484 763 ntBASIC20.86■□□□□ 0.93
CCDC162PA2VCL2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC162PA2VCL2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC162PA2VCL2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC162PA2VCL2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC162PA2VCL2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
CCDC162PA2VCL2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCDC162PA2VCL2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC162PA2VCL2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC162PA2VCL2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC162PA2VCL2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC162PA2VCL2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC162PA2VCL2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC162PA2VCL2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC162PA2VCL2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC162PA2VCL2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC162PA2VCL2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC162PA2VCL2 AC087623.3-201ENST00000607047 1098 ntBASIC20.85■□□□□ 0.93
CCDC162PA2VCL2 MIR6821-201ENST00000617625 74 ntBASIC20.85■□□□□ 0.93
CCDC162PA2VCL2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC162PA2VCL2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC162PA2VCL2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC162PA2VCL2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC162PA2VCL2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC162PA2VCL2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC162PA2VCL2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC162PA2VCL2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC162PA2VCL2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC162PA2VCL2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC162PA2VCL2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC162PA2VCL2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC162PA2VCL2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCDC162PA2VCL2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms