Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.17■□□□□ 0.66
TRBV4-1A0A0J9YWV2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV4-1A0A0J9YWV2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV4-1A0A0J9YWV2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
TRBV4-1A0A0J9YWV2 AC121338.2-201ENST00000622535 1744 ntBASIC19.17■□□□□ 0.66
TRBV4-1A0A0J9YWV2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV4-1A0A0J9YWV2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.16■□□□□ 0.66
TRBV4-1A0A0J9YWV2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRBV4-1A0A0J9YWV2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV4-1A0A0J9YWV2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV4-1A0A0J9YWV2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV4-1A0A0J9YWV2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV4-1A0A0J9YWV2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.16■□□□□ 0.66
TRBV4-1A0A0J9YWV2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV4-1A0A0J9YWV2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV4-1A0A0J9YWV2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.16■□□□□ 0.66
TRBV4-1A0A0J9YWV2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.16■□□□□ 0.66
TRBV4-1A0A0J9YWV2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV4-1A0A0J9YWV2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.16■□□□□ 0.66
TRBV4-1A0A0J9YWV2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.16■□□□□ 0.66
TRBV4-1A0A0J9YWV2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.16■□□□□ 0.66
TRBV4-1A0A0J9YWV2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV4-1A0A0J9YWV2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV4-1A0A0J9YWV2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.16■□□□□ 0.66
TRBV4-1A0A0J9YWV2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV4-1A0A0J9YWV2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.16■□□□□ 0.66
TRBV4-1A0A0J9YWV2 AL391422.3-201ENST00000603791 2761 ntBASIC19.15■□□□□ 0.66
TRBV4-1A0A0J9YWV2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV4-1A0A0J9YWV2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV4-1A0A0J9YWV2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV4-1A0A0J9YWV2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV4-1A0A0J9YWV2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV4-1A0A0J9YWV2 AC055733.4-201ENST00000638462 1354 ntBASIC19.15■□□□□ 0.66
TRBV4-1A0A0J9YWV2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRBV4-1A0A0J9YWV2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV4-1A0A0J9YWV2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV4-1A0A0J9YWV2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRBV4-1A0A0J9YWV2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRBV4-1A0A0J9YWV2 AC027702.1-201ENST00000563810 1770 ntBASIC19.14■□□□□ 0.66
TRBV4-1A0A0J9YWV2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.14■□□□□ 0.65
TRBV4-1A0A0J9YWV2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV4-1A0A0J9YWV2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV4-1A0A0J9YWV2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRBV4-1A0A0J9YWV2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRBV4-1A0A0J9YWV2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV4-1A0A0J9YWV2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV4-1A0A0J9YWV2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV4-1A0A0J9YWV2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV4-1A0A0J9YWV2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV4-1A0A0J9YWV2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.14■□□□□ 0.65
TRBV4-1A0A0J9YWV2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV4-1A0A0J9YWV2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.14■□□□□ 0.65
TRBV4-1A0A0J9YWV2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.14■□□□□ 0.65
TRBV4-1A0A0J9YWV2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.14■□□□□ 0.65
TRBV4-1A0A0J9YWV2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV4-1A0A0J9YWV2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV4-1A0A0J9YWV2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TRBV4-1A0A0J9YWV2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV4-1A0A0J9YWV2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.13■□□□□ 0.65
TRBV4-1A0A0J9YWV2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.13■□□□□ 0.65
TRBV4-1A0A0J9YWV2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV4-1A0A0J9YWV2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV4-1A0A0J9YWV2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV4-1A0A0J9YWV2 AL136116.3-201ENST00000402907 1138 ntBASIC19.13■□□□□ 0.65
TRBV4-1A0A0J9YWV2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV4-1A0A0J9YWV2 AC233992.3-201ENST00000607491 485 ntBASIC19.13■□□□□ 0.65
TRBV4-1A0A0J9YWV2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.13■□□□□ 0.65
TRBV4-1A0A0J9YWV2 AC009237.3-201ENST00000393279 1427 ntBASIC19.13■□□□□ 0.65
TRBV4-1A0A0J9YWV2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV4-1A0A0J9YWV2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV4-1A0A0J9YWV2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV4-1A0A0J9YWV2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV4-1A0A0J9YWV2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.13■□□□□ 0.65
TRBV4-1A0A0J9YWV2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TRBV4-1A0A0J9YWV2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.13■□□□□ 0.65
TRBV4-1A0A0J9YWV2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 UNC93B3-201ENST00000308076 687 ntBASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 IGHV3-19-201ENST00000521488 291 ntBASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 AC126544.1-201ENST00000580842 1059 ntBASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV4-1A0A0J9YWV2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms