Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.89■■□□□ 1.41
PTCH2Q9Y6C5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PTCH2Q9Y6C5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
PTCH2Q9Y6C5 AC061975.6-201ENST00000579045 1553 ntBASIC23.89■■□□□ 1.41
PTCH2Q9Y6C5 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PTCH2Q9Y6C5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.89■■□□□ 1.41
PTCH2Q9Y6C5 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
PTCH2Q9Y6C5 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTCH2Q9Y6C5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
PTCH2Q9Y6C5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PTCH2Q9Y6C5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTCH2Q9Y6C5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.88■■□□□ 1.41
PTCH2Q9Y6C5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.88■■□□□ 1.41
PTCH2Q9Y6C5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PTCH2Q9Y6C5 FAM21FP-204ENST00000608637 956 ntBASIC23.88■■□□□ 1.41
PTCH2Q9Y6C5 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.88■■□□□ 1.41
PTCH2Q9Y6C5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTCH2Q9Y6C5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.88■■□□□ 1.41
PTCH2Q9Y6C5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
PTCH2Q9Y6C5 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTCH2Q9Y6C5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.87■■□□□ 1.41
PTCH2Q9Y6C5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTCH2Q9Y6C5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
PTCH2Q9Y6C5 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.87■■□□□ 1.41
PTCH2Q9Y6C5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.87■■□□□ 1.41
PTCH2Q9Y6C5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC23.87■■□□□ 1.41
PTCH2Q9Y6C5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.87■■□□□ 1.41
PTCH2Q9Y6C5 AL589743.5-201ENST00000616611 1050 ntBASIC23.87■■□□□ 1.41
PTCH2Q9Y6C5 AC100791.3-201ENST00000617619 330 ntBASIC23.87■■□□□ 1.41
PTCH2Q9Y6C5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCH2Q9Y6C5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.86■■□□□ 1.41
PTCH2Q9Y6C5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
PTCH2Q9Y6C5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC23.86■■□□□ 1.41
PTCH2Q9Y6C5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.86■■□□□ 1.41
PTCH2Q9Y6C5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCH2Q9Y6C5 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
PTCH2Q9Y6C5 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PTCH2Q9Y6C5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTCH2Q9Y6C5 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PTCH2Q9Y6C5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PTCH2Q9Y6C5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.85■■□□□ 1.41
PTCH2Q9Y6C5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.85■■□□□ 1.41
PTCH2Q9Y6C5 AC097493.4-201ENST00000641197 219 ntBASIC23.85■■□□□ 1.41
PTCH2Q9Y6C5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTCH2Q9Y6C5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PTCH2Q9Y6C5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 AC012306.2-201ENST00000609350 630 ntBASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 AL049637.2-201ENST00000641778 930 ntBASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.84■■□□□ 1.41
PTCH2Q9Y6C5 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTCH2Q9Y6C5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PTCH2Q9Y6C5 POM121L13P-201ENST00000422362 380 ntBASIC23.83■■□□□ 1.41
PTCH2Q9Y6C5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.83■■□□□ 1.41
PTCH2Q9Y6C5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTCH2Q9Y6C5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.83■■□□□ 1.41
PTCH2Q9Y6C5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.83■■□□□ 1.41
PTCH2Q9Y6C5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23.83■■□□□ 1.41
PTCH2Q9Y6C5 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PTCH2Q9Y6C5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.83■■□□□ 1.4
PTCH2Q9Y6C5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
PTCH2Q9Y6C5 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
PTCH2Q9Y6C5 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PTCH2Q9Y6C5 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCH2Q9Y6C5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCH2Q9Y6C5 AC091799.1-201ENST00000422823 811 ntBASIC23.82■■□□□ 1.4
PTCH2Q9Y6C5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.82■■□□□ 1.4
PTCH2Q9Y6C5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PTCH2Q9Y6C5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.82■■□□□ 1.4
PTCH2Q9Y6C5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCH2Q9Y6C5 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PTCH2Q9Y6C5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCH2Q9Y6C5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PTCH2Q9Y6C5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
PTCH2Q9Y6C5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PTCH2Q9Y6C5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCH2Q9Y6C5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PTCH2Q9Y6C5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PTCH2Q9Y6C5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCH2Q9Y6C5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PTCH2Q9Y6C5 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.81■■□□□ 1.4
PTCH2Q9Y6C5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
PTCH2Q9Y6C5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms