Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN16Q9Y5I7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN16Q9Y5I7 AC073111.5-205ENST00000641717 521 ntBASIC19.61■□□□□ 0.73
CLDN16Q9Y5I7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN16Q9Y5I7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN16Q9Y5I7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CLDN16Q9Y5I7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN16Q9Y5I7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
CLDN16Q9Y5I7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.6■□□□□ 0.73
CLDN16Q9Y5I7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN16Q9Y5I7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN16Q9Y5I7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN16Q9Y5I7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.6■□□□□ 0.73
CLDN16Q9Y5I7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN16Q9Y5I7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
CLDN16Q9Y5I7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLDN16Q9Y5I7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN16Q9Y5I7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.6■□□□□ 0.73
CLDN16Q9Y5I7 CNN2P6-201ENST00000439038 900 ntBASIC19.6■□□□□ 0.73
CLDN16Q9Y5I7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN16Q9Y5I7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLDN16Q9Y5I7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.6■□□□□ 0.73
CLDN16Q9Y5I7 AC010536.3-201ENST00000620306 533 ntBASIC19.6■□□□□ 0.73
CLDN16Q9Y5I7 RARRES2P11-201ENST00000635158 484 ntBASIC19.6■□□□□ 0.73
CLDN16Q9Y5I7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN16Q9Y5I7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN16Q9Y5I7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN16Q9Y5I7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN16Q9Y5I7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN16Q9Y5I7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN16Q9Y5I7 RBM17P2-201ENST00000616397 1405 ntBASIC19.59■□□□□ 0.73
CLDN16Q9Y5I7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN16Q9Y5I7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CLDN16Q9Y5I7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN16Q9Y5I7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN16Q9Y5I7 AC120498.10-201ENST00000621827 505 ntBASIC19.59■□□□□ 0.73
CLDN16Q9Y5I7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN16Q9Y5I7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CLDN16Q9Y5I7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.58■□□□□ 0.73
CLDN16Q9Y5I7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.58■□□□□ 0.73
CLDN16Q9Y5I7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN16Q9Y5I7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CLDN16Q9Y5I7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.58■□□□□ 0.73
CLDN16Q9Y5I7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.58■□□□□ 0.73
CLDN16Q9Y5I7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.58■□□□□ 0.73
CLDN16Q9Y5I7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.58■□□□□ 0.73
CLDN16Q9Y5I7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.58■□□□□ 0.72
CLDN16Q9Y5I7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN16Q9Y5I7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.58■□□□□ 0.72
CLDN16Q9Y5I7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
CLDN16Q9Y5I7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN16Q9Y5I7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN16Q9Y5I7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.58■□□□□ 0.72
CLDN16Q9Y5I7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN16Q9Y5I7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN16Q9Y5I7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN16Q9Y5I7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 AC026310.3-201ENST00000625186 2373 ntBASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 AC243732.1-201ENST00000612648 864 ntBASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN16Q9Y5I7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.56■□□□□ 0.72
CLDN16Q9Y5I7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN16Q9Y5I7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN16Q9Y5I7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN16Q9Y5I7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN16Q9Y5I7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.56■□□□□ 0.72
CLDN16Q9Y5I7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.56■□□□□ 0.72
CLDN16Q9Y5I7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.56■□□□□ 0.72
CLDN16Q9Y5I7 TERF1P5-201ENST00000477545 1207 ntBASIC19.56■□□□□ 0.72
CLDN16Q9Y5I7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.56■□□□□ 0.72
CLDN16Q9Y5I7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.56■□□□□ 0.72
CLDN16Q9Y5I7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.56■□□□□ 0.72
CLDN16Q9Y5I7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.56■□□□□ 0.72
CLDN16Q9Y5I7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
CLDN16Q9Y5I7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
CLDN16Q9Y5I7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN16Q9Y5I7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CLDN16Q9Y5I7 AL024507.2-201ENST00000606070 2574 ntBASIC19.55■□□□□ 0.72
CLDN16Q9Y5I7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN16Q9Y5I7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CLDN16Q9Y5I7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN16Q9Y5I7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms