Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 MCRIP2P1-201ENST00000394346 511 ntBASIC28.55■■■□□ 2.16
TRPM3Q9HCF6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC28.55■■■□□ 2.16
TRPM3Q9HCF6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TRPM3Q9HCF6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC28.55■■■□□ 2.16
TRPM3Q9HCF6 SOX15-203ENST00000570788 1093 ntBASIC28.55■■■□□ 2.16
TRPM3Q9HCF6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
TRPM3Q9HCF6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
TRPM3Q9HCF6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC28.55■■■□□ 2.16
TRPM3Q9HCF6 MIR718-201ENST00000390190 70 ntBASIC28.55■■■□□ 2.16
TRPM3Q9HCF6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
TRPM3Q9HCF6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC28.55■■■□□ 2.16
TRPM3Q9HCF6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC28.54■■■□□ 2.16
TRPM3Q9HCF6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC28.54■■■□□ 2.16
TRPM3Q9HCF6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC28.54■■■□□ 2.16
TRPM3Q9HCF6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TRPM3Q9HCF6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TRPM3Q9HCF6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
TRPM3Q9HCF6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
TRPM3Q9HCF6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
TRPM3Q9HCF6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TRPM3Q9HCF6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC28.53■■■□□ 2.16
TRPM3Q9HCF6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC28.53■■■□□ 2.16
TRPM3Q9HCF6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC28.53■■■□□ 2.16
TRPM3Q9HCF6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
TRPM3Q9HCF6 AC012618.2-201ENST00000428058 849 ntBASIC28.53■■■□□ 2.16
TRPM3Q9HCF6 GXYLT1P3-201ENST00000453058 1193 ntBASIC28.53■■■□□ 2.16
TRPM3Q9HCF6 SNORA78-201ENST00000459373 127 ntBASIC28.53■■■□□ 2.16
TRPM3Q9HCF6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC28.53■■■□□ 2.16
TRPM3Q9HCF6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC28.53■■■□□ 2.16
TRPM3Q9HCF6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TRPM3Q9HCF6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TRPM3Q9HCF6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TRPM3Q9HCF6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
TRPM3Q9HCF6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TRPM3Q9HCF6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC28.52■■■□□ 2.16
TRPM3Q9HCF6 NFE2L3P1-201ENST00000588207 1959 ntBASIC28.52■■■□□ 2.16
TRPM3Q9HCF6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC28.52■■■□□ 2.16
TRPM3Q9HCF6 ECEL1P3-201ENST00000427961 737 ntBASIC28.52■■■□□ 2.16
TRPM3Q9HCF6 AC245052.3-201ENST00000450182 901 ntBASIC28.52■■■□□ 2.16
TRPM3Q9HCF6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC28.51■■■□□ 2.16
TRPM3Q9HCF6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC28.51■■■□□ 2.16
TRPM3Q9HCF6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TRPM3Q9HCF6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC28.51■■■□□ 2.15
TRPM3Q9HCF6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC28.51■■■□□ 2.15
TRPM3Q9HCF6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC28.51■■■□□ 2.15
TRPM3Q9HCF6 AL589743.5-201ENST00000616611 1050 ntBASIC28.51■■■□□ 2.15
TRPM3Q9HCF6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC28.51■■■□□ 2.15
TRPM3Q9HCF6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC28.51■■■□□ 2.15
TRPM3Q9HCF6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
TRPM3Q9HCF6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TRPM3Q9HCF6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC28.5■■■□□ 2.15
TRPM3Q9HCF6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC28.5■■■□□ 2.15
TRPM3Q9HCF6 AC105020.6-201ENST00000621523 1217 ntBASIC28.5■■■□□ 2.15
TRPM3Q9HCF6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
TRPM3Q9HCF6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC28.5■■■□□ 2.15
TRPM3Q9HCF6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
TRPM3Q9HCF6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
TRPM3Q9HCF6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
TRPM3Q9HCF6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
TRPM3Q9HCF6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
TRPM3Q9HCF6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
TRPM3Q9HCF6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
TRPM3Q9HCF6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
TRPM3Q9HCF6 Z99916.2-201ENST00000604037 246 ntBASIC28.49■■■□□ 2.15
TRPM3Q9HCF6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
TRPM3Q9HCF6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
TRPM3Q9HCF6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC28.49■■■□□ 2.15
TRPM3Q9HCF6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
TRPM3Q9HCF6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
TRPM3Q9HCF6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
TRPM3Q9HCF6 CDV3P1-201ENST00000471403 739 ntBASIC28.49■■■□□ 2.15
TRPM3Q9HCF6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC28.49■■■□□ 2.15
TRPM3Q9HCF6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
TRPM3Q9HCF6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
TRPM3Q9HCF6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC28.48■■■□□ 2.15
TRPM3Q9HCF6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC28.48■■■□□ 2.15
TRPM3Q9HCF6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
TRPM3Q9HCF6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
TRPM3Q9HCF6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
TRPM3Q9HCF6 SAPCD2P1-201ENST00000395413 1184 ntBASIC28.48■■■□□ 2.15
TRPM3Q9HCF6 KRT17P3-201ENST00000420566 1262 ntBASIC28.48■■■□□ 2.15
TRPM3Q9HCF6 AC007322.3-201ENST00000426526 701 ntBASIC28.48■■■□□ 2.15
TRPM3Q9HCF6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC28.48■■■□□ 2.15
TRPM3Q9HCF6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC28.48■■■□□ 2.15
TRPM3Q9HCF6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
TRPM3Q9HCF6 C11orf96-202ENST00000528572 1834 ntBASIC28.48■■■□□ 2.15
TRPM3Q9HCF6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC28.48■■■□□ 2.15
TRPM3Q9HCF6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
TRPM3Q9HCF6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
TRPM3Q9HCF6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC28.48■■■□□ 2.15
TRPM3Q9HCF6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
TRPM3Q9HCF6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
TRPM3Q9HCF6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
TRPM3Q9HCF6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
TRPM3Q9HCF6 POM121L13P-201ENST00000422362 380 ntBASIC28.47■■■□□ 2.15
TRPM3Q9HCF6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
TRPM3Q9HCF6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC28.47■■■□□ 2.15
TRPM3Q9HCF6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC28.47■■■□□ 2.15
TRPM3Q9HCF6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
TRPM3Q9HCF6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms