Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 AC010542.4-201ENST00000563151 1910 ntBASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 AC007322.1-201ENST00000426983 750 ntBASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 DUX4L16-201ENST00000555130 1264 ntBASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSBP3Q9BWW4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSBP3Q9BWW4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSBP3Q9BWW4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSBP3Q9BWW4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.46■□□□□ 0.39
SSBP3Q9BWW4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSBP3Q9BWW4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSBP3Q9BWW4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSBP3Q9BWW4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSBP3Q9BWW4 ID1-201ENST00000376105 1233 ntBASIC17.46■□□□□ 0.39
SSBP3Q9BWW4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SSBP3Q9BWW4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.46■□□□□ 0.39
SSBP3Q9BWW4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.46■□□□□ 0.39
SSBP3Q9BWW4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.46■□□□□ 0.39
SSBP3Q9BWW4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SSBP3Q9BWW4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSBP3Q9BWW4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SSBP3Q9BWW4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.46■□□□□ 0.39
SSBP3Q9BWW4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.46■□□□□ 0.39
SSBP3Q9BWW4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SSBP3Q9BWW4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SSBP3Q9BWW4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
SSBP3Q9BWW4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.45■□□□□ 0.38
SSBP3Q9BWW4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.45■□□□□ 0.38
SSBP3Q9BWW4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSBP3Q9BWW4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSBP3Q9BWW4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSBP3Q9BWW4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SSBP3Q9BWW4 MIR663A-201ENST00000385250 93 ntBASIC17.45■□□□□ 0.38
SSBP3Q9BWW4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.45■□□□□ 0.38
SSBP3Q9BWW4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.45■□□□□ 0.38
SSBP3Q9BWW4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.45■□□□□ 0.38
SSBP3Q9BWW4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSBP3Q9BWW4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.45■□□□□ 0.38
SSBP3Q9BWW4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSBP3Q9BWW4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSBP3Q9BWW4 KRT16P2-201ENST00000414673 1423 ntBASIC17.45■□□□□ 0.38
SSBP3Q9BWW4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSBP3Q9BWW4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSBP3Q9BWW4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSBP3Q9BWW4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 CROCCP5-201ENST00000436658 830 ntBASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 AC013268.1-206ENST00000638368 961 ntBASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 AC112229.1-201ENST00000639295 961 ntBASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.44■□□□□ 0.38
SSBP3Q9BWW4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms