Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC026271.2-201ENST00000428091 497 ntBASIC24.81■■□□□ 1.56
NEK1Q96PY6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NEK1Q96PY6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC24.81■■□□□ 1.56
NEK1Q96PY6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
NEK1Q96PY6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC24.81■■□□□ 1.56
NEK1Q96PY6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NEK1Q96PY6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NEK1Q96PY6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NEK1Q96PY6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
NEK1Q96PY6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
NEK1Q96PY6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NEK1Q96PY6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC24.8■■□□□ 1.56
NEK1Q96PY6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
NEK1Q96PY6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
NEK1Q96PY6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NEK1Q96PY6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
NEK1Q96PY6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC24.8■■□□□ 1.56
NEK1Q96PY6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
NEK1Q96PY6 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.8■■□□□ 1.56
NEK1Q96PY6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.8■■□□□ 1.56
NEK1Q96PY6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.8■■□□□ 1.56
NEK1Q96PY6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.8■■□□□ 1.56
NEK1Q96PY6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.8■■□□□ 1.56
NEK1Q96PY6 AC008175.2-201ENST00000612840 297 ntBASIC24.8■■□□□ 1.56
NEK1Q96PY6 AP004607.4-201ENST00000530158 1459 ntBASIC24.8■■□□□ 1.56
NEK1Q96PY6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NEK1Q96PY6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NEK1Q96PY6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC24.8■■□□□ 1.56
NEK1Q96PY6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NEK1Q96PY6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NEK1Q96PY6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
NEK1Q96PY6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NEK1Q96PY6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
NEK1Q96PY6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.79■■□□□ 1.56
NEK1Q96PY6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC24.79■■□□□ 1.56
NEK1Q96PY6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
NEK1Q96PY6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NEK1Q96PY6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NEK1Q96PY6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NEK1Q96PY6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NEK1Q96PY6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.79■■□□□ 1.56
NEK1Q96PY6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.79■■□□□ 1.56
NEK1Q96PY6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NEK1Q96PY6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
NEK1Q96PY6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NEK1Q96PY6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
NEK1Q96PY6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.79■■□□□ 1.56
NEK1Q96PY6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC24.78■■□□□ 1.56
NEK1Q96PY6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NEK1Q96PY6 AC004854.2-201ENST00000608450 1441 ntBASIC24.78■■□□□ 1.56
NEK1Q96PY6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NEK1Q96PY6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NEK1Q96PY6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NEK1Q96PY6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
NEK1Q96PY6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
NEK1Q96PY6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC24.78■■□□□ 1.56
NEK1Q96PY6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC24.78■■□□□ 1.56
NEK1Q96PY6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NEK1Q96PY6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NEK1Q96PY6 POU5F1P4-201ENST00000413175 1085 ntBASIC24.78■■□□□ 1.56
NEK1Q96PY6 AC010141.2-201ENST00000452426 721 ntBASIC24.78■■□□□ 1.56
NEK1Q96PY6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.78■■□□□ 1.56
NEK1Q96PY6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
NEK1Q96PY6 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.78■■□□□ 1.56
NEK1Q96PY6 DUX4L2-201ENST00000561772 1275 ntBASIC24.78■■□□□ 1.56
NEK1Q96PY6 MIR5787-201ENST00000611784 55 ntBASIC24.78■■□□□ 1.56
NEK1Q96PY6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.78■■□□□ 1.56
NEK1Q96PY6 DUX4L6-201ENST00000626483 1275 ntBASIC24.78■■□□□ 1.56
NEK1Q96PY6 DUX4L1-201ENST00000627662 1275 ntBASIC24.78■■□□□ 1.56
NEK1Q96PY6 DUX4L8-201ENST00000629013 1275 ntBASIC24.78■■□□□ 1.56
NEK1Q96PY6 DUX4L3-201ENST00000630187 1275 ntBASIC24.78■■□□□ 1.56
NEK1Q96PY6 DUX4L7-201ENST00000630678 1275 ntBASIC24.78■■□□□ 1.56
NEK1Q96PY6 DUX4L5-201ENST00000630834 1275 ntBASIC24.78■■□□□ 1.56
NEK1Q96PY6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
NEK1Q96PY6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC24.78■■□□□ 1.56
NEK1Q96PY6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NEK1Q96PY6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NEK1Q96PY6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NEK1Q96PY6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC24.77■■□□□ 1.56
NEK1Q96PY6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NEK1Q96PY6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NEK1Q96PY6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC24.77■■□□□ 1.56
NEK1Q96PY6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.77■■□□□ 1.56
NEK1Q96PY6 AC097381.1-201ENST00000429019 1296 ntBASIC24.77■■□□□ 1.56
NEK1Q96PY6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.77■■□□□ 1.56
NEK1Q96PY6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NEK1Q96PY6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.77■■□□□ 1.56
NEK1Q96PY6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.77■■□□□ 1.56
NEK1Q96PY6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
NEK1Q96PY6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC24.77■■□□□ 1.56
NEK1Q96PY6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NEK1Q96PY6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC24.76■■□□□ 1.55
NEK1Q96PY6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC24.76■■□□□ 1.55
NEK1Q96PY6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NEK1Q96PY6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.76■■□□□ 1.55
NEK1Q96PY6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.76■■□□□ 1.55
NEK1Q96PY6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
NEK1Q96PY6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NEK1Q96PY6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
NEK1Q96PY6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms