Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP7Q93009 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP7Q93009 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
USP7Q93009 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.69■□□□□ 0.9
USP7Q93009 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
USP7Q93009 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP7Q93009 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
USP7Q93009 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP7Q93009 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.69■□□□□ 0.9
USP7Q93009 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
USP7Q93009 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.69■□□□□ 0.9
USP7Q93009 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
USP7Q93009 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP7Q93009 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP7Q93009 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP7Q93009 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.68■□□□□ 0.9
USP7Q93009 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP7Q93009 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP7Q93009 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.68■□□□□ 0.9
USP7Q93009 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
USP7Q93009 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.68■□□□□ 0.9
USP7Q93009 AL355802.2-201ENST00000402069 882 ntBASIC20.68■□□□□ 0.9
USP7Q93009 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP7Q93009 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP7Q93009 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP7Q93009 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP7Q93009 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP7Q93009 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP7Q93009 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP7Q93009 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP7Q93009 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP7Q93009 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP7Q93009 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP7Q93009 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.67■□□□□ 0.9
USP7Q93009 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP7Q93009 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.67■□□□□ 0.9
USP7Q93009 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
USP7Q93009 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
USP7Q93009 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP7Q93009 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP7Q93009 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
USP7Q93009 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP7Q93009 NCF1B-203ENST00000435988 1254 ntBASIC20.66■□□□□ 0.9
USP7Q93009 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.66■□□□□ 0.9
USP7Q93009 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.66■□□□□ 0.9
USP7Q93009 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.66■□□□□ 0.9
USP7Q93009 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP7Q93009 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP7Q93009 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.66■□□□□ 0.9
USP7Q93009 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP7Q93009 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.65■□□□□ 0.9
USP7Q93009 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
USP7Q93009 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.65■□□□□ 0.9
USP7Q93009 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.65■□□□□ 0.9
USP7Q93009 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP7Q93009 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
USP7Q93009 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP7Q93009 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP7Q93009 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP7Q93009 MIR663A-201ENST00000385250 93 ntBASIC20.65■□□□□ 0.9
USP7Q93009 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.65■□□□□ 0.9
USP7Q93009 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.65■□□□□ 0.9
USP7Q93009 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.65■□□□□ 0.9
USP7Q93009 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.65■□□□□ 0.9
USP7Q93009 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP7Q93009 Z98882.1-201ENST00000622160 2253 ntBASIC20.65■□□□□ 0.9
USP7Q93009 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
USP7Q93009 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP7Q93009 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.64■□□□□ 0.9
USP7Q93009 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP7Q93009 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.64■□□□□ 0.9
USP7Q93009 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
USP7Q93009 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.9
USP7Q93009 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP7Q93009 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP7Q93009 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP7Q93009 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP7Q93009 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.64■□□□□ 0.89
USP7Q93009 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
USP7Q93009 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.64■□□□□ 0.89
USP7Q93009 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.64■□□□□ 0.89
USP7Q93009 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP7Q93009 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP7Q93009 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP7Q93009 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
USP7Q93009 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP7Q93009 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.64■□□□□ 0.89
USP7Q93009 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
USP7Q93009 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
USP7Q93009 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP7Q93009 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
USP7Q93009 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
USP7Q93009 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP7Q93009 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.63■□□□□ 0.89
USP7Q93009 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP7Q93009 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.63■□□□□ 0.89
USP7Q93009 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.63■□□□□ 0.89
USP7Q93009 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP7Q93009 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.63■□□□□ 0.89
USP7Q93009 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms