Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.99■□□□□ 0.63
HPS1Q92902 AL136967.2-201ENST00000623968 743 ntBASIC18.99■□□□□ 0.63
HPS1Q92902 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPS1Q92902 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPS1Q92902 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.99■□□□□ 0.63
HPS1Q92902 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
HPS1Q92902 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPS1Q92902 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
HPS1Q92902 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.98■□□□□ 0.63
HPS1Q92902 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS1Q92902 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS1Q92902 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS1Q92902 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HPS1Q92902 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
HPS1Q92902 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
HPS1Q92902 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS1Q92902 MIR939-201ENST00000401314 82 ntBASIC18.98■□□□□ 0.63
HPS1Q92902 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HPS1Q92902 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HPS1Q92902 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.98■□□□□ 0.63
HPS1Q92902 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS1Q92902 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.98■□□□□ 0.63
HPS1Q92902 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS1Q92902 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS1Q92902 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HPS1Q92902 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HPS1Q92902 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS1Q92902 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS1Q92902 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HPS1Q92902 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HPS1Q92902 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
HPS1Q92902 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HPS1Q92902 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HPS1Q92902 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HPS1Q92902 AC091305.1-201ENST00000479476 895 ntBASIC18.97■□□□□ 0.63
HPS1Q92902 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.97■□□□□ 0.63
HPS1Q92902 AF213884.3-201ENST00000563833 479 ntBASIC18.97■□□□□ 0.63
HPS1Q92902 RARRES2P6-201ENST00000567333 442 ntBASIC18.97■□□□□ 0.63
HPS1Q92902 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.97■□□□□ 0.63
HPS1Q92902 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
HPS1Q92902 AC011298.3-201ENST00000615796 283 ntBASIC18.97■□□□□ 0.63
HPS1Q92902 AC241377.3-202ENST00000626088 1088 ntBASIC18.97■□□□□ 0.63
HPS1Q92902 AC241585.3-202ENST00000628937 1088 ntBASIC18.97■□□□□ 0.63
HPS1Q92902 AC245100.8-202ENST00000629247 1058 ntBASIC18.97■□□□□ 0.63
HPS1Q92902 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.97■□□□□ 0.63
HPS1Q92902 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.97■□□□□ 0.63
HPS1Q92902 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS1Q92902 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS1Q92902 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS1Q92902 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HPS1Q92902 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS1Q92902 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
HPS1Q92902 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS1Q92902 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS1Q92902 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HPS1Q92902 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.96■□□□□ 0.63
HPS1Q92902 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS1Q92902 C17orf82-201ENST00000623772 1530 ntBASIC18.96■□□□□ 0.63
HPS1Q92902 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS1Q92902 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS1Q92902 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS1Q92902 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS1Q92902 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.96■□□□□ 0.63
HPS1Q92902 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.96■□□□□ 0.63
HPS1Q92902 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS1Q92902 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HPS1Q92902 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS1Q92902 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HPS1Q92902 LETM1P2-201ENST00000597330 2178 ntBASIC18.96■□□□□ 0.63
HPS1Q92902 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HPS1Q92902 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS1Q92902 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.96■□□□□ 0.63
HPS1Q92902 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HPS1Q92902 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS1Q92902 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.96■□□□□ 0.63
HPS1Q92902 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPS1Q92902 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HPS1Q92902 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPS1Q92902 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.95■□□□□ 0.62
HPS1Q92902 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPS1Q92902 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
HPS1Q92902 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.95■□□□□ 0.62
HPS1Q92902 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HPS1Q92902 AP001330.3-201ENST00000520123 633 ntBASIC18.95■□□□□ 0.62
HPS1Q92902 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.95■□□□□ 0.62
HPS1Q92902 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HPS1Q92902 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPS1Q92902 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.95■□□□□ 0.62
HPS1Q92902 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPS1Q92902 AFG3L1P-217ENST00000557444 2447 ntBASIC18.95■□□□□ 0.62
HPS1Q92902 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPS1Q92902 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPS1Q92902 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.95■□□□□ 0.62
HPS1Q92902 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPS1Q92902 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.95■□□□□ 0.62
HPS1Q92902 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.94■□□□□ 0.62
HPS1Q92902 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPS1Q92902 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPS1Q92902 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HPS1Q92902 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms