Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DHX40Q8IX18 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.31■■□□□ 1.32
DHX40Q8IX18 AC136469.2-201ENST00000623944 1028 ntBASIC23.31■■□□□ 1.32
DHX40Q8IX18 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DHX40Q8IX18 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
DHX40Q8IX18 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DHX40Q8IX18 PKD1P6-201ENST00000343738 4769 ntBASIC23.31■■□□□ 1.32
DHX40Q8IX18 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
DHX40Q8IX18 AFG3L1P-217ENST00000557444 2447 ntBASIC23.31■■□□□ 1.32
DHX40Q8IX18 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DHX40Q8IX18 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
DHX40Q8IX18 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DHX40Q8IX18 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DHX40Q8IX18 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.3■■□□□ 1.32
DHX40Q8IX18 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.3■■□□□ 1.32
DHX40Q8IX18 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
DHX40Q8IX18 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DHX40Q8IX18 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
DHX40Q8IX18 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DHX40Q8IX18 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DHX40Q8IX18 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.3■■□□□ 1.32
DHX40Q8IX18 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DHX40Q8IX18 AL138724.1-201ENST00000606771 1088 ntBASIC23.3■■□□□ 1.32
DHX40Q8IX18 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.3■■□□□ 1.32
DHX40Q8IX18 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DHX40Q8IX18 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DHX40Q8IX18 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC23.3■■□□□ 1.32
DHX40Q8IX18 AC007952.6-201ENST00000573168 2673 ntBASIC23.29■■□□□ 1.32
DHX40Q8IX18 AC003957.1-201ENST00000625108 2673 ntBASIC23.29■■□□□ 1.32
DHX40Q8IX18 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
DHX40Q8IX18 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
DHX40Q8IX18 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.29■■□□□ 1.32
DHX40Q8IX18 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DHX40Q8IX18 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.29■■□□□ 1.32
DHX40Q8IX18 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DHX40Q8IX18 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
DHX40Q8IX18 AL139246.5-201ENST00000606645 996 ntBASIC23.29■■□□□ 1.32
DHX40Q8IX18 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.29■■□□□ 1.32
DHX40Q8IX18 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.29■■□□□ 1.32
DHX40Q8IX18 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DHX40Q8IX18 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
DHX40Q8IX18 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
DHX40Q8IX18 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
DHX40Q8IX18 PCDHAC2-203ENST00000615316 3011 ntBASIC23.29■■□□□ 1.32
DHX40Q8IX18 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
DHX40Q8IX18 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DHX40Q8IX18 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
DHX40Q8IX18 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.28■■□□□ 1.32
DHX40Q8IX18 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
DHX40Q8IX18 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DHX40Q8IX18 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DHX40Q8IX18 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DHX40Q8IX18 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
DHX40Q8IX18 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DHX40Q8IX18 AC121338.2-201ENST00000622535 1744 ntBASIC23.28■■□□□ 1.32
DHX40Q8IX18 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.28■■□□□ 1.32
DHX40Q8IX18 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
DHX40Q8IX18 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.28■■□□□ 1.32
DHX40Q8IX18 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DHX40Q8IX18 AC096631.2-201ENST00000436136 790 ntBASIC23.28■■□□□ 1.32
DHX40Q8IX18 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
DHX40Q8IX18 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.28■■□□□ 1.32
DHX40Q8IX18 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.28■■□□□ 1.32
DHX40Q8IX18 SMUG1P1-201ENST00000590640 811 ntBASIC23.28■■□□□ 1.32
DHX40Q8IX18 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.28■■□□□ 1.32
DHX40Q8IX18 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
DHX40Q8IX18 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.28■■□□□ 1.32
DHX40Q8IX18 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
DHX40Q8IX18 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DHX40Q8IX18 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
DHX40Q8IX18 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.28■■□□□ 1.32
DHX40Q8IX18 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
DHX40Q8IX18 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC23.28■■□□□ 1.32
DHX40Q8IX18 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DHX40Q8IX18 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23.28■■□□□ 1.32
DHX40Q8IX18 SYT6-210ENST00000641643 1587 ntBASIC23.27■■□□□ 1.32
DHX40Q8IX18 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DHX40Q8IX18 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
DHX40Q8IX18 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
DHX40Q8IX18 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
DHX40Q8IX18 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.27■■□□□ 1.32
DHX40Q8IX18 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
DHX40Q8IX18 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.27■■□□□ 1.31
DHX40Q8IX18 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.26■■□□□ 1.31
DHX40Q8IX18 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
DHX40Q8IX18 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DHX40Q8IX18 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.26■■□□□ 1.31
DHX40Q8IX18 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.26■■□□□ 1.31
DHX40Q8IX18 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
DHX40Q8IX18 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.26■■□□□ 1.31
DHX40Q8IX18 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DHX40Q8IX18 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DHX40Q8IX18 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.26■■□□□ 1.31
DHX40Q8IX18 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DHX40Q8IX18 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.26■■□□□ 1.31
DHX40Q8IX18 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
DHX40Q8IX18 AC007225.1-201ENST00000566331 1836 ntBASIC23.26■■□□□ 1.31
DHX40Q8IX18 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
DHX40Q8IX18 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DHX40Q8IX18 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms