Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC71Q8IV32 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC71Q8IV32 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC71Q8IV32 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC71Q8IV32 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC71Q8IV32 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC71Q8IV32 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC71Q8IV32 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC71Q8IV32 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC71Q8IV32 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC71Q8IV32 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC71Q8IV32 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC71Q8IV32 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC71Q8IV32 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC71Q8IV32 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC71Q8IV32 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC71Q8IV32 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC71Q8IV32 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC71Q8IV32 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC71Q8IV32 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC71Q8IV32 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC71Q8IV32 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC71Q8IV32 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.61■□□□□ 0.73
CCDC71Q8IV32 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC71Q8IV32 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC71Q8IV32 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC71Q8IV32 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC71Q8IV32 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC71Q8IV32 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC71Q8IV32 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC71Q8IV32 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC71Q8IV32 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC71Q8IV32 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC71Q8IV32 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC71Q8IV32 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC71Q8IV32 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC71Q8IV32 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC71Q8IV32 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC71Q8IV32 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC71Q8IV32 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC71Q8IV32 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC71Q8IV32 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC71Q8IV32 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.6■□□□□ 0.73
CCDC71Q8IV32 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC71Q8IV32 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC71Q8IV32 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC71Q8IV32 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC71Q8IV32 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC71Q8IV32 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC71Q8IV32 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.59■□□□□ 0.73
CCDC71Q8IV32 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC71Q8IV32 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC71Q8IV32 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC71Q8IV32 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC71Q8IV32 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC71Q8IV32 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC71Q8IV32 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.58■□□□□ 0.73
CCDC71Q8IV32 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71Q8IV32 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CCDC71Q8IV32 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71Q8IV32 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC71Q8IV32 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC71Q8IV32 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71Q8IV32 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71Q8IV32 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71Q8IV32 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71Q8IV32 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71Q8IV32 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71Q8IV32 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71Q8IV32 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71Q8IV32 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71Q8IV32 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71Q8IV32 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC71Q8IV32 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71Q8IV32 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC71Q8IV32 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
CCDC71Q8IV32 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC71Q8IV32 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC71Q8IV32 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC71Q8IV32 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CCDC71Q8IV32 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC71Q8IV32 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC71Q8IV32 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC71Q8IV32 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC71Q8IV32 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC71Q8IV32 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC71Q8IV32 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC71Q8IV32 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC71Q8IV32 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC71Q8IV32 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC71Q8IV32 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CCDC71Q8IV32 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC71Q8IV32 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC71Q8IV32 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC71Q8IV32 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC71Q8IV32 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC71Q8IV32 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC71Q8IV32 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC71Q8IV32 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC71Q8IV32 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms