Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.59■□□□□ 0.73
RTL4Q6ZR62 AC104187.1-201ENST00000607510 612 ntBASIC19.59■□□□□ 0.73
RTL4Q6ZR62 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL4Q6ZR62 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL4Q6ZR62 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RTL4Q6ZR62 FAM99A-202ENST00000538190 1989 ntBASIC19.59■□□□□ 0.73
RTL4Q6ZR62 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL4Q6ZR62 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.59■□□□□ 0.73
RTL4Q6ZR62 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL4Q6ZR62 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTL4Q6ZR62 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.58■□□□□ 0.73
RTL4Q6ZR62 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
RTL4Q6ZR62 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTL4Q6ZR62 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.58■□□□□ 0.73
RTL4Q6ZR62 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTL4Q6ZR62 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.58■□□□□ 0.72
RTL4Q6ZR62 AC006015.1-201ENST00000429970 570 ntBASIC19.58■□□□□ 0.72
RTL4Q6ZR62 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.58■□□□□ 0.72
RTL4Q6ZR62 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.58■□□□□ 0.72
RTL4Q6ZR62 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
RTL4Q6ZR62 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTL4Q6ZR62 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.58■□□□□ 0.72
RTL4Q6ZR62 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.58■□□□□ 0.72
RTL4Q6ZR62 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.57■□□□□ 0.72
RTL4Q6ZR62 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL4Q6ZR62 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL4Q6ZR62 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL4Q6ZR62 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTL4Q6ZR62 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.57■□□□□ 0.72
RTL4Q6ZR62 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.57■□□□□ 0.72
RTL4Q6ZR62 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTL4Q6ZR62 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTL4Q6ZR62 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
RTL4Q6ZR62 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.57■□□□□ 0.72
RTL4Q6ZR62 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.57■□□□□ 0.72
RTL4Q6ZR62 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.57■□□□□ 0.72
RTL4Q6ZR62 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL4Q6ZR62 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTL4Q6ZR62 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTL4Q6ZR62 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTL4Q6ZR62 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.57■□□□□ 0.72
RTL4Q6ZR62 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTL4Q6ZR62 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.57■□□□□ 0.72
RTL4Q6ZR62 AL137060.1-201ENST00000618151 2648 ntBASIC19.56■□□□□ 0.72
RTL4Q6ZR62 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTL4Q6ZR62 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTL4Q6ZR62 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTL4Q6ZR62 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RTL4Q6ZR62 KRT18P11-201ENST00000435214 1283 ntBASIC19.56■□□□□ 0.72
RTL4Q6ZR62 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.56■□□□□ 0.72
RTL4Q6ZR62 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.56■□□□□ 0.72
RTL4Q6ZR62 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTL4Q6ZR62 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTL4Q6ZR62 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RTL4Q6ZR62 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTL4Q6ZR62 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTL4Q6ZR62 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.56■□□□□ 0.72
RTL4Q6ZR62 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RTL4Q6ZR62 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.55■□□□□ 0.72
RTL4Q6ZR62 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTL4Q6ZR62 AL121603.2-201ENST00000557373 2117 ntBASIC19.55■□□□□ 0.72
RTL4Q6ZR62 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTL4Q6ZR62 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTL4Q6ZR62 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTL4Q6ZR62 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
RTL4Q6ZR62 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTL4Q6ZR62 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.55■□□□□ 0.72
RTL4Q6ZR62 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTL4Q6ZR62 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.55■□□□□ 0.72
RTL4Q6ZR62 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.55■□□□□ 0.72
RTL4Q6ZR62 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTL4Q6ZR62 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.55■□□□□ 0.72
RTL4Q6ZR62 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.55■□□□□ 0.72
RTL4Q6ZR62 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTL4Q6ZR62 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RTL4Q6ZR62 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTL4Q6ZR62 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTL4Q6ZR62 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RTL4Q6ZR62 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.55■□□□□ 0.72
RTL4Q6ZR62 AC026310.3-201ENST00000625186 2373 ntBASIC19.55■□□□□ 0.72
RTL4Q6ZR62 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RTL4Q6ZR62 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.54■□□□□ 0.72
RTL4Q6ZR62 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RTL4Q6ZR62 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTL4Q6ZR62 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTL4Q6ZR62 AC244015.2-201ENST00000616358 1861 ntBASIC19.54■□□□□ 0.72
RTL4Q6ZR62 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.54■□□□□ 0.72
RTL4Q6ZR62 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.54■□□□□ 0.72
RTL4Q6ZR62 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RTL4Q6ZR62 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTL4Q6ZR62 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RTL4Q6ZR62 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
RTL4Q6ZR62 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTL4Q6ZR62 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTL4Q6ZR62 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms