Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RIF1Q5UIP0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIF1Q5UIP0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RIF1Q5UIP0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.65■□□□□ 0.9
RIF1Q5UIP0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
RIF1Q5UIP0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.64■□□□□ 0.9
RIF1Q5UIP0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.64■□□□□ 0.9
RIF1Q5UIP0 AC008175.2-201ENST00000612840 297 ntBASIC20.64■□□□□ 0.9
RIF1Q5UIP0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RIF1Q5UIP0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIF1Q5UIP0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIF1Q5UIP0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RIF1Q5UIP0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RIF1Q5UIP0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RIF1Q5UIP0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RIF1Q5UIP0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RIF1Q5UIP0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIF1Q5UIP0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIF1Q5UIP0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.63■□□□□ 0.89
RIF1Q5UIP0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.63■□□□□ 0.89
RIF1Q5UIP0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.63■□□□□ 0.89
RIF1Q5UIP0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.63■□□□□ 0.89
RIF1Q5UIP0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RIF1Q5UIP0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
RIF1Q5UIP0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIF1Q5UIP0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIF1Q5UIP0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIF1Q5UIP0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIF1Q5UIP0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIF1Q5UIP0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.63■□□□□ 0.89
RIF1Q5UIP0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.63■□□□□ 0.89
RIF1Q5UIP0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RIF1Q5UIP0 AC053503.5-201ENST00000601508 636 ntBASIC20.63■□□□□ 0.89
RIF1Q5UIP0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.63■□□□□ 0.89
RIF1Q5UIP0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIF1Q5UIP0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
RIF1Q5UIP0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RIF1Q5UIP0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RIF1Q5UIP0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.62■□□□□ 0.89
RIF1Q5UIP0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIF1Q5UIP0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.62■□□□□ 0.89
RIF1Q5UIP0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIF1Q5UIP0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.62■□□□□ 0.89
RIF1Q5UIP0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.62■□□□□ 0.89
RIF1Q5UIP0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIF1Q5UIP0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.62■□□□□ 0.89
RIF1Q5UIP0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIF1Q5UIP0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RIF1Q5UIP0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RIF1Q5UIP0 KRT18P22-201ENST00000402024 1347 ntBASIC20.62■□□□□ 0.89
RIF1Q5UIP0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RIF1Q5UIP0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIF1Q5UIP0 AC073508.3-201ENST00000619697 1419 ntBASIC20.61■□□□□ 0.89
RIF1Q5UIP0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIF1Q5UIP0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIF1Q5UIP0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RIF1Q5UIP0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.61■□□□□ 0.89
RIF1Q5UIP0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.61■□□□□ 0.89
RIF1Q5UIP0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.61■□□□□ 0.89
RIF1Q5UIP0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RIF1Q5UIP0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RIF1Q5UIP0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIF1Q5UIP0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIF1Q5UIP0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.61■□□□□ 0.89
RIF1Q5UIP0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.61■□□□□ 0.89
RIF1Q5UIP0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.61■□□□□ 0.89
RIF1Q5UIP0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.61■□□□□ 0.89
RIF1Q5UIP0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RIF1Q5UIP0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.61■□□□□ 0.89
RIF1Q5UIP0 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.61■□□□□ 0.89
RIF1Q5UIP0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
RIF1Q5UIP0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIF1Q5UIP0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RIF1Q5UIP0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIF1Q5UIP0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RIF1Q5UIP0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RIF1Q5UIP0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RIF1Q5UIP0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RIF1Q5UIP0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.6■□□□□ 0.89
RIF1Q5UIP0 OR7E47P-201ENST00000546390 1422 ntBASIC20.6■□□□□ 0.89
RIF1Q5UIP0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RIF1Q5UIP0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RIF1Q5UIP0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIF1Q5UIP0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIF1Q5UIP0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.6■□□□□ 0.89
RIF1Q5UIP0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.6■□□□□ 0.89
RIF1Q5UIP0 DUSP5P1-201ENST00000441325 1139 ntBASIC20.6■□□□□ 0.89
RIF1Q5UIP0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
RIF1Q5UIP0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.6■□□□□ 0.89
RIF1Q5UIP0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RIF1Q5UIP0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIF1Q5UIP0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RIF1Q5UIP0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIF1Q5UIP0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RIF1Q5UIP0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIF1Q5UIP0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIF1Q5UIP0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RIF1Q5UIP0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.59■□□□□ 0.89
RIF1Q5UIP0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RIF1Q5UIP0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms