Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 KRT18P14-201ENST00000534205 1250 ntBASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 PLK5-205ENST00000642079 1969 ntBASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 AP004607.4-201ENST00000530158 1459 ntBASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RSPO1Q2MKA7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RSPO1Q2MKA7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RSPO1Q2MKA7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RSPO1Q2MKA7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RSPO1Q2MKA7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RSPO1Q2MKA7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.17■□□□□ 0.5
RSPO1Q2MKA7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.17■□□□□ 0.5
RSPO1Q2MKA7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.17■□□□□ 0.5
RSPO1Q2MKA7 KRT18P61-201ENST00000585825 1298 ntBASIC18.17■□□□□ 0.5
RSPO1Q2MKA7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RSPO1Q2MKA7 AC104187.1-201ENST00000607510 612 ntBASIC18.17■□□□□ 0.5
RSPO1Q2MKA7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RSPO1Q2MKA7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RSPO1Q2MKA7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RSPO1Q2MKA7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RSPO1Q2MKA7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RSPO1Q2MKA7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RSPO1Q2MKA7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO1Q2MKA7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO1Q2MKA7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO1Q2MKA7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO1Q2MKA7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO1Q2MKA7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.16■□□□□ 0.5
RSPO1Q2MKA7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.16■□□□□ 0.5
RSPO1Q2MKA7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO1Q2MKA7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO1Q2MKA7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.16■□□□□ 0.5
RSPO1Q2MKA7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO1Q2MKA7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.16■□□□□ 0.5
RSPO1Q2MKA7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO1Q2MKA7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.16■□□□□ 0.5
RSPO1Q2MKA7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.16■□□□□ 0.5
RSPO1Q2MKA7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO1Q2MKA7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO1Q2MKA7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RSPO1Q2MKA7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RSPO1Q2MKA7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RSPO1Q2MKA7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
RSPO1Q2MKA7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.15■□□□□ 0.5
RSPO1Q2MKA7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.15■□□□□ 0.5
RSPO1Q2MKA7 POU5F1P4-201ENST00000413175 1085 ntBASIC18.15■□□□□ 0.5
RSPO1Q2MKA7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RSPO1Q2MKA7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.15■□□□□ 0.5
RSPO1Q2MKA7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.15■□□□□ 0.5
RSPO1Q2MKA7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.15■□□□□ 0.5
RSPO1Q2MKA7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.15■□□□□ 0.5
RSPO1Q2MKA7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.15■□□□□ 0.5
RSPO1Q2MKA7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RSPO1Q2MKA7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RSPO1Q2MKA7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.15■□□□□ 0.5
RSPO1Q2MKA7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RSPO1Q2MKA7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RSPO1Q2MKA7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RSPO1Q2MKA7 AC004854.2-201ENST00000608450 1441 ntBASIC18.15■□□□□ 0.5
RSPO1Q2MKA7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RSPO1Q2MKA7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 AC010141.2-201ENST00000452426 721 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms